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docs(docs): asdded and cleaned up docs

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Emily Boudreaux
2025-07-24 11:10:45 -04:00
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@@ -102,16 +102,21 @@ $(function(){initNavTree('functions_func_m.html',''); initResizable(true); });
<div class="textblock">Here is a list of all functions with links to the classes they belong to:</div>
<h3><a id="index_m" name="index_m"></a>- m -</h3><ul>
<li>make_key()&#160;:&#160;<a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html#a99c80e2f4ba36e88e08e2abd650a08fb">gridfire::partition::GroundStatePartitionFunction</a>, <a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#ac58b95c8530f69f063c8ed8293487aec">gridfire::partition::RauscherThielemannPartitionFunction</a></li>
<li>mapCulledToFull()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a68695f056b660e91285b7e5a931612e1">gridfire::AdaptiveEngineView</a></li>
<li>mapCulledToFullReactionIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a91e742642d8a8d9ec0620779927e5101">gridfire::AdaptiveEngineView</a></li>
<li>mapCulledToFullSpeciesIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a256d14a333f9401039b826cc889761a8">gridfire::AdaptiveEngineView</a></li>
<li>mapFullToCulled()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a3d9d8e862d1c2f0a8ba460c57f6a7f44">gridfire::AdaptiveEngineView</a></li>
<li>mapFullToView()&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a97e5ee4651dbe6754678fe96e4702fee">gridfire::FileDefinedEngineView</a></li>
<li>mapViewToFull()&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#adba3c11b11a04b2907c1635210d73dee">gridfire::FileDefinedEngineView</a></li>
<li>mapViewToFullReactionIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#a74217a1f8fd8e6daff969cb17885315c">gridfire::FileDefinedEngineView</a></li>
<li>mapViewToFullSpeciesIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_file_defined_engine_view.html#aa2373955ef5b0eabf7a57c7208e38bb1">gridfire::FileDefinedEngineView</a></li>
<li>mapFullToView()&#160;:&#160;<a class="el" href="classgridfire_1_1_defined_engine_view.html#a2f59af6fb3516911de2a3e3ff0ed8873">gridfire::DefinedEngineView</a></li>
<li>mapNetInToMolarAbundanceVector()&#160;:&#160;<a class="el" href="classgridfire_1_1_adaptive_engine_view.html#a7d0237956bf3ec7230bc51d88e7f8019">gridfire::AdaptiveEngineView</a>, <a class="el" href="classgridfire_1_1_defined_engine_view.html#a72789c1c3379594b65b560da50192de2">gridfire::DefinedEngineView</a>, <a class="el" href="classgridfire_1_1_dynamic_engine.html#a55f1b7e5ebe2840e1d7c54665ca5411a">gridfire::DynamicEngine</a>, <a class="el" href="classgridfire_1_1_graph_engine.html#a27f3a928e1f6bbe7e847cffed6db729f">gridfire::GraphEngine</a>, <a class="el" href="classgridfire_1_1_multiscale_partitioning_engine_view.html#aada497e8df74a295fdf5df7d7cdf64e0">gridfire::MultiscalePartitioningEngineView</a>, <a class="el" href="class_py_dynamic_engine.html#a61bb4b430fe740cfb2c24e5cc673e4ac">PyDynamicEngine</a></li>
<li>mapViewToFull()&#160;:&#160;<a class="el" href="classgridfire_1_1_defined_engine_view.html#a626ab005bfa08b201518c13627e1f843">gridfire::DefinedEngineView</a></li>
<li>mapViewToFullReactionIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_defined_engine_view.html#aadf373d69a22fcd171a6c251466d53d1">gridfire::DefinedEngineView</a></li>
<li>mapViewToFullSpeciesIndex()&#160;:&#160;<a class="el" href="classgridfire_1_1_defined_engine_view.html#af6fb8c3c7894b505bd81d15f012f154a">gridfire::DefinedEngineView</a></li>
<li>MESANetworkFileParser()&#160;:&#160;<a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#ac5963d0da6780de753df996b490f8d2c">gridfire::io::MESANetworkFileParser</a></li>
<li>miss()&#160;:&#160;<a class="el" href="structgridfire_1_1_multiscale_partitioning_engine_view_1_1_cache_stats.html#ac55fb580dd4b9763cefe4612555b03f3">gridfire::MultiscalePartitioningEngineView::CacheStats</a></li>
<li>misses()&#160;:&#160;<a class="el" href="structgridfire_1_1_multiscale_partitioning_engine_view_1_1_cache_stats.html#a5df4f2c27e9eaa781c972a8c9b595787">gridfire::MultiscalePartitioningEngineView::CacheStats</a></li>
<li>MolarAbundance()&#160;:&#160;<a class="el" href="structgridfire_1_1_net_in.html#a47781e8d5503e3b4f12d669e2cbcfb65">gridfire::NetIn</a></li>
<li>MultiscalePartitioningEngineView()&#160;:&#160;<a class="el" href="classgridfire_1_1_multiscale_partitioning_engine_view.html#a0df457c0f0f6f403a295335c84fd828f">gridfire::MultiscalePartitioningEngineView</a></li>
</ul>
</div><!-- contents -->
</div><!-- doc-content -->