docs(docs): added doxygen html directory
This commit is contained in:
469
docs/html/reaction_8h_source.html
Normal file
469
docs/html/reaction_8h_source.html
Normal file
@@ -0,0 +1,469 @@
|
||||
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
|
||||
<html xmlns="http://www.w3.org/1999/xhtml" lang="en-US">
|
||||
<head>
|
||||
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
|
||||
<meta http-equiv="X-UA-Compatible" content="IE=11"/>
|
||||
<meta name="generator" content="Doxygen 1.13.2"/>
|
||||
<meta name="viewport" content="width=device-width, initial-scale=1"/>
|
||||
<title>GridFire: src/network/include/gridfire/reaction/reaction.h Source File</title>
|
||||
<link href="tabs.css" rel="stylesheet" type="text/css"/>
|
||||
<script type="text/javascript" src="jquery.js"></script>
|
||||
<script type="text/javascript" src="dynsections.js"></script>
|
||||
<script type="text/javascript" src="clipboard.js"></script>
|
||||
<link href="navtree.css" rel="stylesheet" type="text/css"/>
|
||||
<script type="text/javascript" src="navtreedata.js"></script>
|
||||
<script type="text/javascript" src="navtree.js"></script>
|
||||
<script type="text/javascript" src="resize.js"></script>
|
||||
<script type="text/javascript" src="cookie.js"></script>
|
||||
<link href="search/search.css" rel="stylesheet" type="text/css"/>
|
||||
<script type="text/javascript" src="search/searchdata.js"></script>
|
||||
<script type="text/javascript" src="search/search.js"></script>
|
||||
<link href="doxygen.css" rel="stylesheet" type="text/css" />
|
||||
<link href="doxygen-awesome.css" rel="stylesheet" type="text/css"/>
|
||||
<link href="doxygen-awesome-sidebar-only.css" rel="stylesheet" type="text/css"/>
|
||||
</head>
|
||||
<body>
|
||||
<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
|
||||
<div id="titlearea">
|
||||
<table cellspacing="0" cellpadding="0">
|
||||
<tbody>
|
||||
<tr id="projectrow">
|
||||
<td id="projectalign">
|
||||
<div id="projectname">GridFire<span id="projectnumber"> 0.0.1a</span>
|
||||
</div>
|
||||
<div id="projectbrief">General Purpose Nuclear Network</div>
|
||||
</td>
|
||||
</tr>
|
||||
</tbody>
|
||||
</table>
|
||||
</div>
|
||||
<!-- end header part -->
|
||||
<!-- Generated by Doxygen 1.13.2 -->
|
||||
<script type="text/javascript">
|
||||
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&dn=expat.txt MIT */
|
||||
var searchBox = new SearchBox("searchBox", "search/",'.html');
|
||||
/* @license-end */
|
||||
</script>
|
||||
<script type="text/javascript">
|
||||
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&dn=expat.txt MIT */
|
||||
$(function() { codefold.init(0); });
|
||||
/* @license-end */
|
||||
</script>
|
||||
<script type="text/javascript" src="menudata.js"></script>
|
||||
<script type="text/javascript" src="menu.js"></script>
|
||||
<script type="text/javascript">
|
||||
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&dn=expat.txt MIT */
|
||||
$(function() {
|
||||
initMenu('',true,false,'search.php','Search',true);
|
||||
$(function() { init_search(); });
|
||||
});
|
||||
/* @license-end */
|
||||
</script>
|
||||
<div id="main-nav"></div>
|
||||
</div><!-- top -->
|
||||
<div id="side-nav" class="ui-resizable side-nav-resizable">
|
||||
<div id="nav-tree">
|
||||
<div id="nav-tree-contents">
|
||||
<div id="nav-sync" class="sync"></div>
|
||||
</div>
|
||||
</div>
|
||||
<div id="splitbar" style="-moz-user-select:none;"
|
||||
class="ui-resizable-handle">
|
||||
</div>
|
||||
</div>
|
||||
<script type="text/javascript">
|
||||
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&dn=expat.txt MIT */
|
||||
$(function(){initNavTree('reaction_8h_source.html',''); initResizable(true); });
|
||||
/* @license-end */
|
||||
</script>
|
||||
<div id="doc-content">
|
||||
<!-- window showing the filter options -->
|
||||
<div id="MSearchSelectWindow"
|
||||
onmouseover="return searchBox.OnSearchSelectShow()"
|
||||
onmouseout="return searchBox.OnSearchSelectHide()"
|
||||
onkeydown="return searchBox.OnSearchSelectKey(event)">
|
||||
</div>
|
||||
|
||||
<!-- iframe showing the search results (closed by default) -->
|
||||
<div id="MSearchResultsWindow">
|
||||
<div id="MSearchResults">
|
||||
<div class="SRPage">
|
||||
<div id="SRIndex">
|
||||
<div id="SRResults"></div>
|
||||
<div class="SRStatus" id="Loading">Loading...</div>
|
||||
<div class="SRStatus" id="Searching">Searching...</div>
|
||||
<div class="SRStatus" id="NoMatches">No Matches</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<div class="header">
|
||||
<div class="headertitle"><div class="title">reaction.h</div></div>
|
||||
</div><!--header-->
|
||||
<div class="contents">
|
||||
<a href="reaction_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a id="l00001" name="l00001"></a><span class="lineno"> 1</span><span class="preprocessor">#pragma once</span></div>
|
||||
<div class="line"><a id="l00002" name="l00002"></a><span class="lineno"> 2</span> </div>
|
||||
<div class="line"><a id="l00003" name="l00003"></a><span class="lineno"> 3</span><span class="preprocessor">#include <string_view></span></div>
|
||||
<div class="line"><a id="l00004" name="l00004"></a><span class="lineno"> 4</span> </div>
|
||||
<div class="line"><a id="l00005" name="l00005"></a><span class="lineno"> 5</span><span class="preprocessor">#include "fourdst/composition/atomicSpecies.h"</span></div>
|
||||
<div class="line"><a id="l00006" name="l00006"></a><span class="lineno"> 6</span><span class="preprocessor">#include "fourdst/logging/logging.h"</span></div>
|
||||
<div class="line"><a id="l00007" name="l00007"></a><span class="lineno"> 7</span><span class="preprocessor">#include "quill/Logger.h"</span></div>
|
||||
<div class="line"><a id="l00008" name="l00008"></a><span class="lineno"> 8</span><span class="preprocessor">#include <unordered_map></span></div>
|
||||
<div class="line"><a id="l00009" name="l00009"></a><span class="lineno"> 9</span><span class="preprocessor">#include <vector></span></div>
|
||||
<div class="line"><a id="l00010" name="l00010"></a><span class="lineno"> 10</span><span class="preprocessor">#include <unordered_set></span></div>
|
||||
<div class="line"><a id="l00011" name="l00011"></a><span class="lineno"> 11</span> </div>
|
||||
<div class="line"><a id="l00012" name="l00012"></a><span class="lineno"> 12</span> </div>
|
||||
<div class="line"><a id="l00013" name="l00013"></a><span class="lineno"> 13</span><span class="preprocessor">#include "cppad/cppad.hpp"</span></div>
|
||||
<div class="line"><a id="l00014" name="l00014"></a><span class="lineno"> 14</span></div>
|
||||
<div class="foldopen" id="foldopen00024" data-start="{" data-end="}">
|
||||
<div class="line"><a id="l00024" name="l00024"></a><span class="lineno"><a class="line" href="namespacegridfire_1_1reaction.html"> 24</a></span><span class="keyword">namespace </span><a class="code hl_namespace" href="namespacegridfire_1_1reaction.html">gridfire::reaction</a> {</div>
|
||||
<div class="foldopen" id="foldopen00032" data-start="{" data-end="};">
|
||||
<div class="line"><a id="l00032" name="l00032"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html"> 32</a></span> <span class="keyword">struct </span><a class="code hl_struct" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html">RateCoefficientSet</a> {</div>
|
||||
<div class="line"><a id="l00033" name="l00033"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a2fa6b65e300dcd181222b743c2b3d6ed"> 33</a></span> <span class="keywordtype">double</span> <a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a2fa6b65e300dcd181222b743c2b3d6ed">a0</a>; </div>
|
||||
<div class="line"><a id="l00034" name="l00034"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#ace9dbd928e179784e47eaa108ce8d721"> 34</a></span> <span class="keywordtype">double</span> <a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#ace9dbd928e179784e47eaa108ce8d721">a1</a>; </div>
|
||||
<div class="line"><a id="l00035" name="l00035"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a2a9316d19bc2e8bf0a7872eb6fe8a53f"> 35</a></span> <span class="keywordtype">double</span> <a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a2a9316d19bc2e8bf0a7872eb6fe8a53f">a2</a>; </div>
|
||||
<div class="line"><a id="l00036" name="l00036"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a3d047485ebb57d6c763adfe4aae493b1"> 36</a></span> <span class="keywordtype">double</span> <a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a3d047485ebb57d6c763adfe4aae493b1">a3</a>; </div>
|
||||
<div class="line"><a id="l00037" name="l00037"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#ae57b2eac71cb4ed9947f40c9cb8fc3ca"> 37</a></span> <span class="keywordtype">double</span> <a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#ae57b2eac71cb4ed9947f40c9cb8fc3ca">a4</a>; </div>
|
||||
<div class="line"><a id="l00038" name="l00038"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a8c79db4e649b4eb1d29c43ebe4e95458"> 38</a></span> <span class="keywordtype">double</span> <a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a8c79db4e649b4eb1d29c43ebe4e95458">a5</a>; </div>
|
||||
<div class="line"><a id="l00039" name="l00039"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#adf8e6ed7f91cb9e15d1469a808b1877a"> 39</a></span> <span class="keywordtype">double</span> <a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#adf8e6ed7f91cb9e15d1469a808b1877a">a6</a>; </div>
|
||||
<div class="line"><a id="l00040" name="l00040"></a><span class="lineno"> 40</span></div>
|
||||
<div class="foldopen" id="foldopen00047" data-start="{" data-end="}">
|
||||
<div class="line"><a id="l00047" name="l00047"></a><span class="lineno"><a class="line" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a31a92f95a27e4430209dfc2bdfa5c40f"> 47</a></span> <span class="keyword">friend</span> std::ostream& <a class="code hl_friend" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a31a92f95a27e4430209dfc2bdfa5c40f">operator<<</a>(std::ostream& os, <span class="keyword">const</span> <a class="code hl_struct" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html">RateCoefficientSet</a>& r) {</div>
|
||||
<div class="line"><a id="l00048" name="l00048"></a><span class="lineno"> 48</span> os << <span class="stringliteral">"["</span> << r.<a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a2fa6b65e300dcd181222b743c2b3d6ed">a0</a> << <span class="stringliteral">", "</span> << r.<a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#ace9dbd928e179784e47eaa108ce8d721">a1</a> << <span class="stringliteral">", "</span> << r.<a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a2a9316d19bc2e8bf0a7872eb6fe8a53f">a2</a> << <span class="stringliteral">", "</span></div>
|
||||
<div class="line"><a id="l00049" name="l00049"></a><span class="lineno"> 49</span> << r.<a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a3d047485ebb57d6c763adfe4aae493b1">a3</a> << <span class="stringliteral">", "</span> << r.<a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#ae57b2eac71cb4ed9947f40c9cb8fc3ca">a4</a> << <span class="stringliteral">", "</span> << r.<a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a8c79db4e649b4eb1d29c43ebe4e95458">a5</a> << <span class="stringliteral">", "</span> << r.<a class="code hl_variable" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#adf8e6ed7f91cb9e15d1469a808b1877a">a6</a> << <span class="stringliteral">"]"</span>;</div>
|
||||
<div class="line"><a id="l00050" name="l00050"></a><span class="lineno"> 50</span> <span class="keywordflow">return</span> os;</div>
|
||||
<div class="line"><a id="l00051" name="l00051"></a><span class="lineno"> 51</span> }</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00052" name="l00052"></a><span class="lineno"> 52</span> };</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00053" name="l00053"></a><span class="lineno"> 53</span></div>
|
||||
<div class="foldopen" id="foldopen00071" data-start="{" data-end="};">
|
||||
<div class="line"><a id="l00071" name="l00071"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html"> 71</a></span> <span class="keyword">class </span><a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a7dff19d387e771d96c26e98d75ee9d5c">Reaction</a> {</div>
|
||||
<div class="line"><a id="l00072" name="l00072"></a><span class="lineno"> 72</span> <span class="keyword">public</span>:</div>
|
||||
<div class="line"><a id="l00076" name="l00076"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#ab1860df84843be70f97469761e11ab6a"> 76</a></span> <span class="keyword">virtual</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#ab1860df84843be70f97469761e11ab6a">~Reaction</a>() = <span class="keywordflow">default</span>;</div>
|
||||
<div class="line"><a id="l00077" name="l00077"></a><span class="lineno"> 77</span></div>
|
||||
<div class="line"><a id="l00090" name="l00090"></a><span class="lineno"> 90</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a7dff19d387e771d96c26e98d75ee9d5c">Reaction</a>(</div>
|
||||
<div class="line"><a id="l00091" name="l00091"></a><span class="lineno"> 91</span> <span class="keyword">const</span> std::string_view <span class="keywordtype">id</span>,</div>
|
||||
<div class="line"><a id="l00092" name="l00092"></a><span class="lineno"> 92</span> <span class="keyword">const</span> std::string_view <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a78f42664cc957e266b6cf15fda09be97">peName</a>,</div>
|
||||
<div class="line"><a id="l00093" name="l00093"></a><span class="lineno"> 93</span> <span class="keyword">const</span> <span class="keywordtype">int</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a5cb438adfefb640e4bc58e09053bd629">chapter</a>,</div>
|
||||
<div class="line"><a id="l00094" name="l00094"></a><span class="lineno"> 94</span> <span class="keyword">const</span> std::vector<fourdst::atomic::Species> &<a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a0b543e9b0bb4a21efe4b29780d9bdf5b">reactants</a>,</div>
|
||||
<div class="line"><a id="l00095" name="l00095"></a><span class="lineno"> 95</span> <span class="keyword">const</span> std::vector<fourdst::atomic::Species> &<a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a6e2ff61b9e8409f2a561663628b8ce02">products</a>,</div>
|
||||
<div class="line"><a id="l00096" name="l00096"></a><span class="lineno"> 96</span> <span class="keyword">const</span> <span class="keywordtype">double</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#abda0b4e4313e6d4ba57acf37d5976fb8">qValue</a>,</div>
|
||||
<div class="line"><a id="l00097" name="l00097"></a><span class="lineno"> 97</span> <span class="keyword">const</span> std::string_view label,</div>
|
||||
<div class="line"><a id="l00098" name="l00098"></a><span class="lineno"> 98</span> <span class="keyword">const</span> <a class="code hl_struct" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html">RateCoefficientSet</a> &sets,</div>
|
||||
<div class="line"><a id="l00099" name="l00099"></a><span class="lineno"> 99</span> <span class="keyword">const</span> <span class="keywordtype">bool</span> reverse = <span class="keyword">false</span>);</div>
|
||||
<div class="line"><a id="l00100" name="l00100"></a><span class="lineno"> 100</span></div>
|
||||
<div class="line"><a id="l00106" name="l00106"></a><span class="lineno"> 106</span> [[nodiscard]] <span class="keyword">virtual</span> <span class="keywordtype">double</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#ad81e9b2a1773470059ca6989c60556ec">calculate_rate</a>(<span class="keyword">const</span> <span class="keywordtype">double</span> T9) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00107" name="l00107"></a><span class="lineno"> 107</span></div>
|
||||
<div class="line"><a id="l00113" name="l00113"></a><span class="lineno"> 113</span> [[nodiscard]] <span class="keyword">virtual</span> CppAD::AD<double> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#ad81e9b2a1773470059ca6989c60556ec">calculate_rate</a>(<span class="keyword">const</span> CppAD::AD<double> T9) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00114" name="l00114"></a><span class="lineno"> 114</span></div>
|
||||
<div class="line"><a id="l00119" name="l00119"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a78f42664cc957e266b6cf15fda09be97"> 119</a></span> [[nodiscard]] <span class="keyword">virtual</span> std::string_view <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a78f42664cc957e266b6cf15fda09be97">peName</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a6124aa9fc2306349e1dd879a37923248">m_peName</a>; }</div>
|
||||
<div class="line"><a id="l00120" name="l00120"></a><span class="lineno"> 120</span></div>
|
||||
<div class="line"><a id="l00125" name="l00125"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a5cb438adfefb640e4bc58e09053bd629"> 125</a></span> [[nodiscard]] <span class="keywordtype">int</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a5cb438adfefb640e4bc58e09053bd629">chapter</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a16f9cbb6269817099d3dc07d4e63da7b">m_chapter</a>; }</div>
|
||||
<div class="line"><a id="l00126" name="l00126"></a><span class="lineno"> 126</span></div>
|
||||
<div class="line"><a id="l00131" name="l00131"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a410e2ab0784ad751f82bbe55be603db0"> 131</a></span> [[nodiscard]] std::string_view <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a410e2ab0784ad751f82bbe55be603db0">sourceLabel</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a0185c6be5465d113f25e00aee1297cd6">m_sourceLabel</a>; }</div>
|
||||
<div class="line"><a id="l00132" name="l00132"></a><span class="lineno"> 132</span></div>
|
||||
<div class="line"><a id="l00137" name="l00137"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a85968076e686e67763f4fdf4f72a892e"> 137</a></span> [[nodiscard]] <span class="keyword">const</span> <a class="code hl_struct" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html">RateCoefficientSet</a>& <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a85968076e686e67763f4fdf4f72a892e">rateCoefficients</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>; }</div>
|
||||
<div class="line"><a id="l00138" name="l00138"></a><span class="lineno"> 138</span></div>
|
||||
<div class="line"><a id="l00144" name="l00144"></a><span class="lineno"> 144</span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#ab92785f331a446e51a0960b75d60b37b">contains</a>(<span class="keyword">const</span> fourdst::atomic::Species& species) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00145" name="l00145"></a><span class="lineno"> 145</span></div>
|
||||
<div class="line"><a id="l00151" name="l00151"></a><span class="lineno"> 151</span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#abbe243affa61ba9b2cd2a7b905cd5e45">contains_reactant</a>(<span class="keyword">const</span> fourdst::atomic::Species& species) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00152" name="l00152"></a><span class="lineno"> 152</span></div>
|
||||
<div class="line"><a id="l00158" name="l00158"></a><span class="lineno"> 158</span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a074d3cd2421fd5d0133e47f0522403e2">contains_product</a>(<span class="keyword">const</span> fourdst::atomic::Species& species) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00159" name="l00159"></a><span class="lineno"> 159</span></div>
|
||||
<div class="line"><a id="l00164" name="l00164"></a><span class="lineno"> 164</span> [[nodiscard]] std::unordered_set<fourdst::atomic::Species> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a7dc8fda87e0581fde6da0a81cf4d7224">all_species</a>() <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00165" name="l00165"></a><span class="lineno"> 165</span></div>
|
||||
<div class="line"><a id="l00170" name="l00170"></a><span class="lineno"> 170</span> [[nodiscard]] std::unordered_set<fourdst::atomic::Species> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a855ea65e4b62fb0cddc550424a4bc923">reactant_species</a>() <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00171" name="l00171"></a><span class="lineno"> 171</span></div>
|
||||
<div class="line"><a id="l00176" name="l00176"></a><span class="lineno"> 176</span> [[nodiscard]] std::unordered_set<fourdst::atomic::Species> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a01c67726efbaa2ff8e4d6f2c965f485c">product_species</a>() <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00177" name="l00177"></a><span class="lineno"> 177</span></div>
|
||||
<div class="line"><a id="l00182" name="l00182"></a><span class="lineno"> 182</span> [[nodiscard]] <span class="keywordtype">size_t</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a1d3c8ab6d55155f9a21ad80ed8b9ef97">num_species</a>() <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00183" name="l00183"></a><span class="lineno"> 183</span></div>
|
||||
<div class="line"><a id="l00189" name="l00189"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#aaf0c94db6536b4a9ac1ec08a5c8f01ac"> 189</a></span> [[nodiscard]] <span class="keywordtype">int</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#aaf0c94db6536b4a9ac1ec08a5c8f01ac">stoichiometry</a>(<span class="keyword">const</span> fourdst::atomic::Species& species) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00190" name="l00190"></a><span class="lineno"> 190</span></div>
|
||||
<div class="line"><a id="l00195" name="l00195"></a><span class="lineno"> 195</span> [[nodiscard]] std::unordered_map<fourdst::atomic::Species, int> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#ad359c06d7196c1a7a955a7b66a51dbe3">stoichiometry</a>() <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00196" name="l00196"></a><span class="lineno"> 196</span></div>
|
||||
<div class="line"><a id="l00201" name="l00201"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a084c38181408ed5e6fa2a2dd4d0ec905"> 201</a></span> [[nodiscard]] std::string_view <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a084c38181408ed5e6fa2a2dd4d0ec905">id</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a5c685e5a736b51799e5b9f6746c4126b">m_id</a>; }</div>
|
||||
<div class="line"><a id="l00202" name="l00202"></a><span class="lineno"> 202</span></div>
|
||||
<div class="line"><a id="l00207" name="l00207"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#abda0b4e4313e6d4ba57acf37d5976fb8"> 207</a></span> [[nodiscard]] <span class="keywordtype">double</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#abda0b4e4313e6d4ba57acf37d5976fb8">qValue</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a59122a2898bb9af640cc3e9aeb49028b">m_qValue</a>; }</div>
|
||||
<div class="line"><a id="l00208" name="l00208"></a><span class="lineno"> 208</span></div>
|
||||
<div class="line"><a id="l00213" name="l00213"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a0b543e9b0bb4a21efe4b29780d9bdf5b"> 213</a></span> [[nodiscard]] <span class="keyword">const</span> std::vector<fourdst::atomic::Species>& <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a0b543e9b0bb4a21efe4b29780d9bdf5b">reactants</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a87a065b3c7806bcdb5eadb7de2978a11">m_reactants</a>; }</div>
|
||||
<div class="line"><a id="l00214" name="l00214"></a><span class="lineno"> 214</span></div>
|
||||
<div class="line"><a id="l00219" name="l00219"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a6e2ff61b9e8409f2a561663628b8ce02"> 219</a></span> [[nodiscard]] <span class="keyword">const</span> std::vector<fourdst::atomic::Species>& <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a6e2ff61b9e8409f2a561663628b8ce02">products</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a4b5607ed413acdf29539b8a57461e49e">m_products</a>; }</div>
|
||||
<div class="line"><a id="l00220" name="l00220"></a><span class="lineno"> 220</span></div>
|
||||
<div class="line"><a id="l00225" name="l00225"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#aa67d05dfabf007c1acad34052d9a1dba"> 225</a></span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#aa67d05dfabf007c1acad34052d9a1dba">is_reverse</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a0b0b9ac498080aae91ffd466d1ae85a9">m_reverse</a>; }</div>
|
||||
<div class="line"><a id="l00226" name="l00226"></a><span class="lineno"> 226</span></div>
|
||||
<div class="line"><a id="l00231" name="l00231"></a><span class="lineno"> 231</span> [[nodiscard]] <span class="keywordtype">double</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#aa1d71e38fc55ae691dbb9ec459a612a5">excess_energy</a>() <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00232" name="l00232"></a><span class="lineno"> 232</span></div>
|
||||
<div class="line"><a id="l00238" name="l00238"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#ac426457cf0a54a15b206549422083bac"> 238</a></span> <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#ac426457cf0a54a15b206549422083bac">operator==</a>(<span class="keyword">const</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a7dff19d387e771d96c26e98d75ee9d5c">Reaction</a>& other)<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a5c685e5a736b51799e5b9f6746c4126b">m_id</a> == other.<a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a5c685e5a736b51799e5b9f6746c4126b">m_id</a>; }</div>
|
||||
<div class="line"><a id="l00239" name="l00239"></a><span class="lineno"> 239</span></div>
|
||||
<div class="line"><a id="l00245" name="l00245"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a2f1c115a99bc7c477a2e858ff18b1b51"> 245</a></span> <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a2f1c115a99bc7c477a2e858ff18b1b51">operator!=</a>(<span class="keyword">const</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a7dff19d387e771d96c26e98d75ee9d5c">Reaction</a>& other)<span class="keyword"> const </span>{ <span class="keywordflow">return</span> !(*<span class="keyword">this</span> == other); }</div>
|
||||
<div class="line"><a id="l00246" name="l00246"></a><span class="lineno"> 246</span></div>
|
||||
<div class="line"><a id="l00253" name="l00253"></a><span class="lineno"> 253</span> [[nodiscard]] uint64_t <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#af6c20e6d03a2d9f87632f71a90b88cb5">hash</a>(uint64_t seed = 0) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00254" name="l00254"></a><span class="lineno"> 254</span> </div>
|
||||
<div class="line"><a id="l00255" name="l00255"></a><span class="lineno"> 255</span> <span class="keyword">protected</span>:</div>
|
||||
<div class="line"><a id="l00256" name="l00256"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a7044d0a1d59d85502ce554e4ec2167e4"> 256</a></span> quill::Logger* <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a7044d0a1d59d85502ce554e4ec2167e4">m_logger</a> = fourdst::logging::LogManager::getInstance().getLogger(<span class="stringliteral">"log"</span>);</div>
|
||||
<div class="line"><a id="l00257" name="l00257"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a5c685e5a736b51799e5b9f6746c4126b"> 257</a></span> std::string <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a5c685e5a736b51799e5b9f6746c4126b">m_id</a>; </div>
|
||||
<div class="line"><a id="l00258" name="l00258"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a6124aa9fc2306349e1dd879a37923248"> 258</a></span> std::string <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a6124aa9fc2306349e1dd879a37923248">m_peName</a>; </div>
|
||||
<div class="line"><a id="l00259" name="l00259"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a16f9cbb6269817099d3dc07d4e63da7b"> 259</a></span> <span class="keywordtype">int</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a16f9cbb6269817099d3dc07d4e63da7b">m_chapter</a>; </div>
|
||||
<div class="line"><a id="l00260" name="l00260"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a59122a2898bb9af640cc3e9aeb49028b"> 260</a></span> <span class="keywordtype">double</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a59122a2898bb9af640cc3e9aeb49028b">m_qValue</a> = 0.0; </div>
|
||||
<div class="line"><a id="l00261" name="l00261"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a87a065b3c7806bcdb5eadb7de2978a11"> 261</a></span> std::vector<fourdst::atomic::Species> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a87a065b3c7806bcdb5eadb7de2978a11">m_reactants</a>; </div>
|
||||
<div class="line"><a id="l00262" name="l00262"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a4b5607ed413acdf29539b8a57461e49e"> 262</a></span> std::vector<fourdst::atomic::Species> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a4b5607ed413acdf29539b8a57461e49e">m_products</a>; </div>
|
||||
<div class="line"><a id="l00263" name="l00263"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a0185c6be5465d113f25e00aee1297cd6"> 263</a></span> std::string <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a0185c6be5465d113f25e00aee1297cd6">m_sourceLabel</a>; </div>
|
||||
<div class="line"><a id="l00264" name="l00264"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72"> 264</a></span> <a class="code hl_struct" href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html">RateCoefficientSet</a> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>; </div>
|
||||
<div class="line"><a id="l00265" name="l00265"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a0b0b9ac498080aae91ffd466d1ae85a9"> 265</a></span> <span class="keywordtype">bool</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#a0b0b9ac498080aae91ffd466d1ae85a9">m_reverse</a> = <span class="keyword">false</span>; </div>
|
||||
<div class="line"><a id="l00266" name="l00266"></a><span class="lineno"> 266</span> <span class="keyword">private</span>:</div>
|
||||
<div class="line"><a id="l00275" name="l00275"></a><span class="lineno"> 275</span> <span class="keyword">template</span> <<span class="keyword">typename</span> T></div>
|
||||
<div class="foldopen" id="foldopen00276" data-start="{" data-end="}">
|
||||
<div class="line"><a id="l00276" name="l00276"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction.html#a648b9ed6108bed2469dc028fb7e351af"> 276</a></span> [[nodiscard]] T <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a648b9ed6108bed2469dc028fb7e351af">calculate_rate</a>(<span class="keyword">const</span> T T9)<span class="keyword"> const </span>{</div>
|
||||
<div class="line"><a id="l00277" name="l00277"></a><span class="lineno"> 277</span> <span class="keyword">const</span> T T913 = CppAD::pow(T9, 1.0/3.0);</div>
|
||||
<div class="line"><a id="l00278" name="l00278"></a><span class="lineno"> 278</span> <span class="keyword">const</span> T T953 = CppAD::pow(T9, 5.0/3.0);</div>
|
||||
<div class="line"><a id="l00279" name="l00279"></a><span class="lineno"> 279</span> <span class="keyword">const</span> T logT9 = CppAD::log(T9);</div>
|
||||
<div class="line"><a id="l00280" name="l00280"></a><span class="lineno"> 280</span> <span class="keyword">const</span> T exponent = <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>.a0 +</div>
|
||||
<div class="line"><a id="l00281" name="l00281"></a><span class="lineno"> 281</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>.a1 / T9 +</div>
|
||||
<div class="line"><a id="l00282" name="l00282"></a><span class="lineno"> 282</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>.a2 / T913 +</div>
|
||||
<div class="line"><a id="l00283" name="l00283"></a><span class="lineno"> 283</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>.a3 * T913 +</div>
|
||||
<div class="line"><a id="l00284" name="l00284"></a><span class="lineno"> 284</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>.a4 * T9 +</div>
|
||||
<div class="line"><a id="l00285" name="l00285"></a><span class="lineno"> 285</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>.a5 * T953 +</div>
|
||||
<div class="line"><a id="l00286" name="l00286"></a><span class="lineno"> 286</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">m_rateCoefficients</a>.a6 * logT9;</div>
|
||||
<div class="line"><a id="l00287" name="l00287"></a><span class="lineno"> 287</span> <span class="keywordflow">return</span> CppAD::exp(exponent);</div>
|
||||
<div class="line"><a id="l00288" name="l00288"></a><span class="lineno"> 288</span> }</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00289" name="l00289"></a><span class="lineno"> 289</span> };</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00290" name="l00290"></a><span class="lineno"> 290</span></div>
|
||||
<div class="foldopen" id="foldopen00307" data-start="{" data-end="};">
|
||||
<div class="line"><a id="l00307" name="l00307"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html"> 307</a></span> <span class="keyword">class </span><a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">ReactionSet</a> {</div>
|
||||
<div class="line"><a id="l00308" name="l00308"></a><span class="lineno"> 308</span> <span class="keyword">public</span>:</div>
|
||||
<div class="line"><a id="l00313" name="l00313"></a><span class="lineno"> 313</span> <span class="keyword">explicit</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">ReactionSet</a>(std::vector<Reaction> reactions);</div>
|
||||
<div class="line"><a id="l00314" name="l00314"></a><span class="lineno"> 314</span></div>
|
||||
<div class="line"><a id="l00319" name="l00319"></a><span class="lineno"> 319</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">ReactionSet</a>(<span class="keyword">const</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">ReactionSet</a>& other);</div>
|
||||
<div class="line"><a id="l00320" name="l00320"></a><span class="lineno"> 320</span></div>
|
||||
<div class="line"><a id="l00326" name="l00326"></a><span class="lineno"> 326</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">ReactionSet</a>& <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#aac890bf7fdf689890d765ff67489520a">operator=</a>(<span class="keyword">const</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">ReactionSet</a>& other);</div>
|
||||
<div class="line"><a id="l00327" name="l00327"></a><span class="lineno"> 327</span></div>
|
||||
<div class="line"><a id="l00331" name="l00331"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#a64ca23fc5bdc41b868c3fbeb5aef6d98"> 331</a></span> <span class="keyword">virtual</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a64ca23fc5bdc41b868c3fbeb5aef6d98">~ReactionSet</a>() = <span class="keywordflow">default</span>;</div>
|
||||
<div class="line"><a id="l00332" name="l00332"></a><span class="lineno"> 332</span></div>
|
||||
<div class="line"><a id="l00337" name="l00337"></a><span class="lineno"> 337</span> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#acea41c2ffb010e46bc5cf56f5f244fac">add_reaction</a>(<a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a> <a class="code hl_namespace" href="namespacegridfire_1_1reaction.html">reaction</a>);</div>
|
||||
<div class="line"><a id="l00338" name="l00338"></a><span class="lineno"> 338</span></div>
|
||||
<div class="line"><a id="l00343" name="l00343"></a><span class="lineno"> 343</span> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a1177193b1e46b4e5be630028883ab8dd">remove_reaction</a>(<span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a>& <a class="code hl_namespace" href="namespacegridfire_1_1reaction.html">reaction</a>);</div>
|
||||
<div class="line"><a id="l00344" name="l00344"></a><span class="lineno"> 344</span></div>
|
||||
<div class="line"><a id="l00350" name="l00350"></a><span class="lineno"> 350</span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#ae5f8078e77a700a8356487fbd69ba387">contains</a>(<span class="keyword">const</span> std::string_view& <span class="keywordtype">id</span>) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00351" name="l00351"></a><span class="lineno"> 351</span></div>
|
||||
<div class="line"><a id="l00357" name="l00357"></a><span class="lineno"> 357</span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#ae5f8078e77a700a8356487fbd69ba387">contains</a>(<span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a>& <a class="code hl_namespace" href="namespacegridfire_1_1reaction.html">reaction</a>) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00358" name="l00358"></a><span class="lineno"> 358</span></div>
|
||||
<div class="line"><a id="l00363" name="l00363"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#a6b07a81a3500e4e91d3bcd336b66e35d"> 363</a></span> [[nodiscard]] <span class="keyword">virtual</span> <span class="keywordtype">size_t</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a6b07a81a3500e4e91d3bcd336b66e35d">size</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c">m_reactions</a>.size(); }</div>
|
||||
<div class="line"><a id="l00364" name="l00364"></a><span class="lineno"> 364</span></div>
|
||||
<div class="line"><a id="l00368" name="l00368"></a><span class="lineno"> 368</span> <span class="keywordtype">void</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#aa8e0d65aafc6e0320690b4906e1bf300">clear</a>();</div>
|
||||
<div class="line"><a id="l00369" name="l00369"></a><span class="lineno"> 369</span></div>
|
||||
<div class="line"><a id="l00375" name="l00375"></a><span class="lineno"> 375</span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a5b872a8519740a6d06cfaed03784826a">contains_species</a>(<span class="keyword">const</span> fourdst::atomic::Species& species) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00376" name="l00376"></a><span class="lineno"> 376</span></div>
|
||||
<div class="line"><a id="l00382" name="l00382"></a><span class="lineno"> 382</span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a256998eddf292f744d51cdc3e178d4c2">contains_reactant</a>(<span class="keyword">const</span> fourdst::atomic::Species& species) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00383" name="l00383"></a><span class="lineno"> 383</span></div>
|
||||
<div class="line"><a id="l00389" name="l00389"></a><span class="lineno"> 389</span> [[nodiscard]] <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4bdf50219d686a6cbc0b3cc5365dc18e">contains_product</a>(<span class="keyword">const</span> fourdst::atomic::Species& species) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00390" name="l00390"></a><span class="lineno"> 390</span></div>
|
||||
<div class="line"><a id="l00397" name="l00397"></a><span class="lineno"> 397</span> [[nodiscard]] <span class="keyword">virtual</span> <span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a>& <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4057f74ae647b691f4f61f150553c52b">operator[]</a>(<span class="keywordtype">size_t</span> index) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00398" name="l00398"></a><span class="lineno"> 398</span></div>
|
||||
<div class="line"><a id="l00405" name="l00405"></a><span class="lineno"> 405</span> [[nodiscard]] <span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction.html">Reaction</a>& <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4057f74ae647b691f4f61f150553c52b">operator[]</a>(<span class="keyword">const</span> std::string_view& <span class="keywordtype">id</span>) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00406" name="l00406"></a><span class="lineno"> 406</span></div>
|
||||
<div class="line"><a id="l00412" name="l00412"></a><span class="lineno"> 412</span> <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a4e572e823a80b905e7d002b612123135">operator==</a>(<span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a>& other) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00413" name="l00413"></a><span class="lineno"> 413</span></div>
|
||||
<div class="line"><a id="l00419" name="l00419"></a><span class="lineno"> 419</span> <span class="keywordtype">bool</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8">operator!=</a>(<span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_reaction_set.html">ReactionSet</a>& other) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00420" name="l00420"></a><span class="lineno"> 420</span></div>
|
||||
<div class="line"><a id="l00429" name="l00429"></a><span class="lineno"> 429</span> [[nodiscard]] uint64_t <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a3209bb7c2a41deabaab059f6c671776f">hash</a>(uint64_t seed = 0) <span class="keyword">const</span>;</div>
|
||||
<div class="line"><a id="l00430" name="l00430"></a><span class="lineno"> 430</span></div>
|
||||
<div class="line"><a id="l00435" name="l00435"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#a228f2a00f46a6ee01be887490a722613"> 435</a></span> <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a228f2a00f46a6ee01be887490a722613">begin</a>() { <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c">m_reactions</a>.begin(); }</div>
|
||||
<div class="line"><a id="l00436" name="l00436"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#adb73fe9ff0178359409e2bea46a620c2"> 436</a></span> [[nodiscard]] <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#adb73fe9ff0178359409e2bea46a620c2">begin</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c">m_reactions</a>.cbegin(); }</div>
|
||||
<div class="line"><a id="l00437" name="l00437"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#abae9fbc4b4306479a6cd3173ac628987"> 437</a></span> <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#abae9fbc4b4306479a6cd3173ac628987">end</a>() { <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c">m_reactions</a>.end(); }</div>
|
||||
<div class="line"><a id="l00438" name="l00438"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#a436f9c4b8f8a4e115b19728d57d8e105"> 438</a></span> [[nodiscard]] <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#a436f9c4b8f8a4e115b19728d57d8e105">end</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c">m_reactions</a>.cend(); }</div>
|
||||
<div class="line"><a id="l00440" name="l00440"></a><span class="lineno"> 440</span> <span class="keyword">private</span>:</div>
|
||||
<div class="line"><a id="l00441" name="l00441"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#aff5ae284012009164d4b3033577709eb"> 441</a></span> quill::Logger* <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#aff5ae284012009164d4b3033577709eb">m_logger</a> = fourdst::logging::LogManager::getInstance().getLogger(<span class="stringliteral">"log"</span>);</div>
|
||||
<div class="line"><a id="l00442" name="l00442"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c"> 442</a></span> std::vector<Reaction> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c">m_reactions</a>;</div>
|
||||
<div class="line"><a id="l00443" name="l00443"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#af92e3003b2a3606b48ab857cdedc3111"> 443</a></span> std::string <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#af92e3003b2a3606b48ab857cdedc3111">m_id</a>;</div>
|
||||
<div class="line"><a id="l00444" name="l00444"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_reaction_set.html#ad3e2715e9e4d6b4f1dc54b969a1322f4"> 444</a></span> std::unordered_map<std::string, Reaction> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_reaction_set.html#ad3e2715e9e4d6b4f1dc54b969a1322f4">m_reactionNameMap</a>; </div>
|
||||
<div class="line"><a id="l00445" name="l00445"></a><span class="lineno"> 445</span> </div>
|
||||
<div class="line"><a id="l00446" name="l00446"></a><span class="lineno"> 446</span> };</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00447" name="l00447"></a><span class="lineno"> 447</span> </div>
|
||||
<div class="line"><a id="l00448" name="l00448"></a><span class="lineno"> 448</span></div>
|
||||
<div class="foldopen" id="foldopen00459" data-start="{" data-end="};">
|
||||
<div class="line"><a id="l00459" name="l00459"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html"> 459</a></span> <span class="keyword">class </span><a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a6965906ea33ebd0d615811219d9e9537">LogicalReaction</a> final : <span class="keyword">public</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a7dff19d387e771d96c26e98d75ee9d5c">Reaction</a> {</div>
|
||||
<div class="line"><a id="l00460" name="l00460"></a><span class="lineno"> 460</span> <span class="keyword">public</span>:</div>
|
||||
<div class="line"><a id="l00466" name="l00466"></a><span class="lineno"> 466</span> <span class="keyword">explicit</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a6965906ea33ebd0d615811219d9e9537">LogicalReaction</a>(<span class="keyword">const</span> std::vector<Reaction> &reactions);</div>
|
||||
<div class="line"><a id="l00467" name="l00467"></a><span class="lineno"> 467</span></div>
|
||||
<div class="line"><a id="l00474" name="l00474"></a><span class="lineno"> 474</span> <span class="keywordtype">void</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a14a24cb8ea25a1514134acc51197f1de">add_reaction</a>(<span class="keyword">const</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction.html#a7dff19d387e771d96c26e98d75ee9d5c">Reaction</a>& <a class="code hl_namespace" href="namespacegridfire_1_1reaction.html">reaction</a>);</div>
|
||||
<div class="line"><a id="l00475" name="l00475"></a><span class="lineno"> 475</span></div>
|
||||
<div class="line"><a id="l00480" name="l00480"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#afa41050855b842c63db16c94d2e9b897"> 480</a></span> [[nodiscard]] <span class="keywordtype">size_t</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#afa41050855b842c63db16c94d2e9b897">size</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">m_rates</a>.size(); }</div>
|
||||
<div class="line"><a id="l00481" name="l00481"></a><span class="lineno"> 481</span></div>
|
||||
<div class="line"><a id="l00486" name="l00486"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#add094eda0e71126f8443698d7f3317f4"> 486</a></span> [[nodiscard]] std::vector<std::string> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#add094eda0e71126f8443698d7f3317f4">sources</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a7fe91d24e20ebc76d612f6ad742f476f">m_sources</a>; }</div>
|
||||
<div class="line"><a id="l00487" name="l00487"></a><span class="lineno"> 487</span></div>
|
||||
<div class="line"><a id="l00493" name="l00493"></a><span class="lineno"> 493</span> [[nodiscard]] <span class="keywordtype">double</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a1d2fb3b6a6a1860ace98b32447d1dd1b">calculate_rate</a>(<span class="keyword">const</span> <span class="keywordtype">double</span> T9) <span class="keyword">const override</span>;</div>
|
||||
<div class="line"><a id="l00494" name="l00494"></a><span class="lineno"> 494</span></div>
|
||||
<div class="line"><a id="l00500" name="l00500"></a><span class="lineno"> 500</span> [[nodiscard]] CppAD::AD<double> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a1d2fb3b6a6a1860ace98b32447d1dd1b">calculate_rate</a>(<span class="keyword">const</span> CppAD::AD<double> T9) <span class="keyword">const override</span>;</div>
|
||||
<div class="line"><a id="l00501" name="l00501"></a><span class="lineno"> 501</span></div>
|
||||
<div class="line"><a id="l00506" name="l00506"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a4ae3806e5e1a802b86a6de292d043476"> 506</a></span> <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a4ae3806e5e1a802b86a6de292d043476">begin</a>() { <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">m_rates</a>.begin(); }</div>
|
||||
<div class="line"><a id="l00507" name="l00507"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a5d410de1053f8028faed1f0d0a6083f5"> 507</a></span> [[nodiscard]] <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a5d410de1053f8028faed1f0d0a6083f5">begin</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">m_rates</a>.cbegin(); }</div>
|
||||
<div class="line"><a id="l00508" name="l00508"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#af8d23557326e6c8499fa4919ac0bd972"> 508</a></span> <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#af8d23557326e6c8499fa4919ac0bd972">end</a>() { <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">m_rates</a>.end(); }</div>
|
||||
<div class="line"><a id="l00509" name="l00509"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a054994f733b44293b4d79f3a9b207560"> 509</a></span> [[nodiscard]] <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a054994f733b44293b4d79f3a9b207560">end</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">m_rates</a>.cend(); }</div>
|
||||
<div class="line"><a id="l00511" name="l00511"></a><span class="lineno"> 511</span> </div>
|
||||
<div class="line"><a id="l00512" name="l00512"></a><span class="lineno"> 512</span> <span class="keyword">private</span>:</div>
|
||||
<div class="line"><a id="l00513" name="l00513"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a7fe91d24e20ebc76d612f6ad742f476f"> 513</a></span> std::vector<std::string> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a7fe91d24e20ebc76d612f6ad742f476f">m_sources</a>; </div>
|
||||
<div class="line"><a id="l00514" name="l00514"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d"> 514</a></span> std::vector<RateCoefficientSet> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">m_rates</a>; </div>
|
||||
<div class="line"><a id="l00515" name="l00515"></a><span class="lineno"> 515</span> </div>
|
||||
<div class="line"><a id="l00516" name="l00516"></a><span class="lineno"> 516</span> <span class="keyword">private</span>:</div>
|
||||
<div class="line"><a id="l00525" name="l00525"></a><span class="lineno"> 525</span> <span class="keyword">template</span> <<span class="keyword">typename</span> T></div>
|
||||
<div class="foldopen" id="foldopen00526" data-start="{" data-end="}">
|
||||
<div class="line"><a id="l00526" name="l00526"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a019b721d83741acdb16036f00739f87c"> 526</a></span> [[nodiscard]] T <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a019b721d83741acdb16036f00739f87c">calculate_rate</a>(<span class="keyword">const</span> T T9)<span class="keyword"> const </span>{</div>
|
||||
<div class="line"><a id="l00527" name="l00527"></a><span class="lineno"> 527</span> T sum = <span class="keyword">static_cast<</span>T<span class="keyword">></span>(0.0);</div>
|
||||
<div class="line"><a id="l00528" name="l00528"></a><span class="lineno"> 528</span> <span class="keyword">const</span> T T913 = CppAD::pow(T9, 1.0/3.0);</div>
|
||||
<div class="line"><a id="l00529" name="l00529"></a><span class="lineno"> 529</span> <span class="keyword">const</span> T T953 = CppAD::pow(T9, 5.0/3.0);</div>
|
||||
<div class="line"><a id="l00530" name="l00530"></a><span class="lineno"> 530</span> <span class="keyword">const</span> T logT9 = CppAD::log(T9);</div>
|
||||
<div class="line"><a id="l00531" name="l00531"></a><span class="lineno"> 531</span> <span class="comment">// ReSharper disable once CppUseStructuredBinding</span></div>
|
||||
<div class="line"><a id="l00532" name="l00532"></a><span class="lineno"> 532</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& rate : <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">m_rates</a>) {</div>
|
||||
<div class="line"><a id="l00533" name="l00533"></a><span class="lineno"> 533</span> <span class="keyword">const</span> T exponent = rate.a0 +</div>
|
||||
<div class="line"><a id="l00534" name="l00534"></a><span class="lineno"> 534</span> rate.a1 / T9 +</div>
|
||||
<div class="line"><a id="l00535" name="l00535"></a><span class="lineno"> 535</span> rate.a2 / T913 +</div>
|
||||
<div class="line"><a id="l00536" name="l00536"></a><span class="lineno"> 536</span> rate.a3 * T913 +</div>
|
||||
<div class="line"><a id="l00537" name="l00537"></a><span class="lineno"> 537</span> rate.a4 * T9 +</div>
|
||||
<div class="line"><a id="l00538" name="l00538"></a><span class="lineno"> 538</span> rate.a5 * T953 +</div>
|
||||
<div class="line"><a id="l00539" name="l00539"></a><span class="lineno"> 539</span> rate.a6 * logT9;</div>
|
||||
<div class="line"><a id="l00540" name="l00540"></a><span class="lineno"> 540</span> sum += CppAD::exp(exponent);</div>
|
||||
<div class="line"><a id="l00541" name="l00541"></a><span class="lineno"> 541</span> }</div>
|
||||
<div class="line"><a id="l00542" name="l00542"></a><span class="lineno"> 542</span> <span class="keywordflow">return</span> sum;</div>
|
||||
<div class="line"><a id="l00543" name="l00543"></a><span class="lineno"> 543</span> }</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00544" name="l00544"></a><span class="lineno"> 544</span> };</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00545" name="l00545"></a><span class="lineno"> 545</span></div>
|
||||
<div class="foldopen" id="foldopen00554" data-start="{" data-end="};">
|
||||
<div class="line"><a id="l00554" name="l00554"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html"> 554</a></span> <span class="keyword">class </span><a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ac650a2a2c83cfb618f11a924552e251d">LogicalReactionSet</a> final : <span class="keyword">public</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">ReactionSet</a> {</div>
|
||||
<div class="line"><a id="l00555" name="l00555"></a><span class="lineno"> 555</span> <span class="keyword">public</span>:</div>
|
||||
<div class="line"><a id="l00559" name="l00559"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ac650a2a2c83cfb618f11a924552e251d"> 559</a></span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ac650a2a2c83cfb618f11a924552e251d">LogicalReactionSet</a>() = <span class="keyword">delete</span>;</div>
|
||||
<div class="line"><a id="l00560" name="l00560"></a><span class="lineno"> 560</span></div>
|
||||
<div class="line"><a id="l00567" name="l00567"></a><span class="lineno"> 567</span> <span class="keyword">explicit</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ac650a2a2c83cfb618f11a924552e251d">LogicalReactionSet</a>(<span class="keyword">const</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">ReactionSet</a>& reactionSet);</div>
|
||||
<div class="line"><a id="l00568" name="l00568"></a><span class="lineno"> 568</span></div>
|
||||
<div class="line"><a id="l00573" name="l00573"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#afeed26abc72e5c529a76c1da41edfa67"> 573</a></span> <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#afeed26abc72e5c529a76c1da41edfa67">begin</a>() { <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">m_reactions</a>.begin(); }</div>
|
||||
<div class="line"><a id="l00574" name="l00574"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a15f08e96cce0ed23ca93fb83399eb8a4"> 574</a></span> [[nodiscard]] <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a15f08e96cce0ed23ca93fb83399eb8a4">begin</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">m_reactions</a>.cbegin(); }</div>
|
||||
<div class="line"><a id="l00575" name="l00575"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a9707407faf8efd3f4da745a54d3fa9e2"> 575</a></span> <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a9707407faf8efd3f4da745a54d3fa9e2">end</a>() { <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">m_reactions</a>.end(); }</div>
|
||||
<div class="line"><a id="l00576" name="l00576"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a70b669622690196e68eedfd2a8fd6318"> 576</a></span> [[nodiscard]] <span class="keyword">auto</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a70b669622690196e68eedfd2a8fd6318">end</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">m_reactions</a>.cend(); }</div>
|
||||
<div class="line"><a id="l00578" name="l00578"></a><span class="lineno"> 578</span></div>
|
||||
<div class="line"><a id="l00583" name="l00583"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a3bcdf2f98c19e9b95e03ad62d6ff7da7"> 583</a></span> [[nodiscard]] <span class="keywordtype">size_t</span> <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a3bcdf2f98c19e9b95e03ad62d6ff7da7">size</a>()<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">m_reactions</a>.size(); }</div>
|
||||
<div class="line"><a id="l00584" name="l00584"></a><span class="lineno"> 584</span></div>
|
||||
<div class="line"><a id="l00590" name="l00590"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a00001bbc0f888b167da50ae9fc2a75af"> 590</a></span> [[nodiscard]] <span class="keyword">const</span> <a class="code hl_class" href="classgridfire_1_1reaction_1_1_logical_reaction.html">LogicalReaction</a>& <a class="code hl_function" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a00001bbc0f888b167da50ae9fc2a75af">operator[]</a>(<span class="keywordtype">size_t</span> index)<span class="keyword"> const </span>{ <span class="keywordflow">return</span> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">m_reactions</a>[index]; }</div>
|
||||
<div class="line"><a id="l00591" name="l00591"></a><span class="lineno"> 591</span> <span class="keyword">private</span>:</div>
|
||||
<div class="line"><a id="l00592" name="l00592"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ad5c1f6a1642c47437dbf8cc20a32b51e"> 592</a></span> quill::Logger* <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ad5c1f6a1642c47437dbf8cc20a32b51e">m_logger</a> = fourdst::logging::LogManager::getInstance().getLogger(<span class="stringliteral">"log"</span>);</div>
|
||||
<div class="line"><a id="l00593" name="l00593"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9"> 593</a></span> std::vector<LogicalReaction> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">m_reactions</a>;</div>
|
||||
<div class="line"><a id="l00594" name="l00594"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a7e21865d3dafb65d2bf3b051ee55c4c2"> 594</a></span> std::string <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a7e21865d3dafb65d2bf3b051ee55c4c2">m_id</a>;</div>
|
||||
<div class="line"><a id="l00595" name="l00595"></a><span class="lineno"><a class="line" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a49280e0f29d2d4e322d76831688f7f27"> 595</a></span> std::unordered_map<std::string, LogicalReaction> <a class="code hl_variable" href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a49280e0f29d2d4e322d76831688f7f27">m_reactionNameMap</a>; </div>
|
||||
<div class="line"><a id="l00596" name="l00596"></a><span class="lineno"> 596</span> };</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00597" name="l00597"></a><span class="lineno"> 597</span> </div>
|
||||
<div class="line"><a id="l00598" name="l00598"></a><span class="lineno"> 598</span>}</div>
|
||||
</div>
|
||||
<div class="line"><a id="l00599" name="l00599"></a><span class="lineno"> 599</span> </div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html">gridfire::reaction::LogicalReaction</a></div><div class="ttdoc">Represents a "logical" reaction that aggregates rates from multiple sources.</div><div class="ttdef"><b>Definition</b> <a href="#l00459">reaction.h:459</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a019b721d83741acdb16036f00739f87c"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a019b721d83741acdb16036f00739f87c">gridfire::reaction::LogicalReaction::calculate_rate</a></div><div class="ttdeci">T calculate_rate(const T T9) const</div><div class="ttdoc">Template implementation for calculating the total reaction rate.</div><div class="ttdef"><b>Definition</b> <a href="#l00526">reaction.h:526</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a054994f733b44293b4d79f3a9b207560"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a054994f733b44293b4d79f3a9b207560">gridfire::reaction::LogicalReaction::end</a></div><div class="ttdeci">auto end() const</div><div class="ttdef"><b>Definition</b> <a href="#l00509">reaction.h:509</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a14a24cb8ea25a1514134acc51197f1de"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a14a24cb8ea25a1514134acc51197f1de">gridfire::reaction::LogicalReaction::add_reaction</a></div><div class="ttdeci">void add_reaction(const Reaction &reaction)</div><div class="ttdoc">Adds another Reaction source to this logical reaction.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00317">reaction.cpp:317</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a1d2fb3b6a6a1860ace98b32447d1dd1b"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a1d2fb3b6a6a1860ace98b32447d1dd1b">gridfire::reaction::LogicalReaction::calculate_rate</a></div><div class="ttdeci">double calculate_rate(const double T9) const override</div><div class="ttdoc">Calculates the total reaction rate by summing all source rates.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00339">reaction.cpp:339</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a4ae3806e5e1a802b86a6de292d043476"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a4ae3806e5e1a802b86a6de292d043476">gridfire::reaction::LogicalReaction::begin</a></div><div class="ttdeci">auto begin()</div><div class="ttdef"><b>Definition</b> <a href="#l00506">reaction.h:506</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a5d410de1053f8028faed1f0d0a6083f5"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a5d410de1053f8028faed1f0d0a6083f5">gridfire::reaction::LogicalReaction::begin</a></div><div class="ttdeci">auto begin() const</div><div class="ttdef"><b>Definition</b> <a href="#l00507">reaction.h:507</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a6965906ea33ebd0d615811219d9e9537"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a6965906ea33ebd0d615811219d9e9537">gridfire::reaction::LogicalReaction::LogicalReaction</a></div><div class="ttdeci">LogicalReaction(const std::vector< Reaction > &reactions)</div><div class="ttdoc">Constructs a LogicalReaction from a vector of Reaction objects.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00288">reaction.cpp:288</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a7fe91d24e20ebc76d612f6ad742f476f"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a7fe91d24e20ebc76d612f6ad742f476f">gridfire::reaction::LogicalReaction::m_sources</a></div><div class="ttdeci">std::vector< std::string > m_sources</div><div class="ttdoc">List of source labels.</div><div class="ttdef"><b>Definition</b> <a href="#l00513">reaction.h:513</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_a81f75f0085f8a5a45169f0b7240c809d"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#a81f75f0085f8a5a45169f0b7240c809d">gridfire::reaction::LogicalReaction::m_rates</a></div><div class="ttdeci">std::vector< RateCoefficientSet > m_rates</div><div class="ttdoc">List of rate coefficient sets from each source.</div><div class="ttdef"><b>Definition</b> <a href="#l00514">reaction.h:514</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_add094eda0e71126f8443698d7f3317f4"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#add094eda0e71126f8443698d7f3317f4">gridfire::reaction::LogicalReaction::sources</a></div><div class="ttdeci">std::vector< std::string > sources() const</div><div class="ttdoc">Gets the list of source labels for the aggregated rates.</div><div class="ttdef"><b>Definition</b> <a href="#l00486">reaction.h:486</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_af8d23557326e6c8499fa4919ac0bd972"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#af8d23557326e6c8499fa4919ac0bd972">gridfire::reaction::LogicalReaction::end</a></div><div class="ttdeci">auto end()</div><div class="ttdef"><b>Definition</b> <a href="#l00508">reaction.h:508</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_html_afa41050855b842c63db16c94d2e9b897"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction.html#afa41050855b842c63db16c94d2e9b897">gridfire::reaction::LogicalReaction::size</a></div><div class="ttdeci">size_t size() const</div><div class="ttdoc">Gets the number of source rates contributing to this logical reaction.</div><div class="ttdef"><b>Definition</b> <a href="#l00480">reaction.h:480</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_a00001bbc0f888b167da50ae9fc2a75af"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a00001bbc0f888b167da50ae9fc2a75af">gridfire::reaction::LogicalReactionSet::operator[]</a></div><div class="ttdeci">const LogicalReaction & operator[](size_t index) const</div><div class="ttdoc">Accesses a logical reaction by its index.</div><div class="ttdef"><b>Definition</b> <a href="#l00590">reaction.h:590</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_a04f5579b45258e623a0b8f1d3d43fee9"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a04f5579b45258e623a0b8f1d3d43fee9">gridfire::reaction::LogicalReactionSet::m_reactions</a></div><div class="ttdeci">std::vector< LogicalReaction > m_reactions</div><div class="ttdef"><b>Definition</b> <a href="#l00593">reaction.h:593</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_a15f08e96cce0ed23ca93fb83399eb8a4"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a15f08e96cce0ed23ca93fb83399eb8a4">gridfire::reaction::LogicalReactionSet::begin</a></div><div class="ttdeci">auto begin() const</div><div class="ttdef"><b>Definition</b> <a href="#l00574">reaction.h:574</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_a3bcdf2f98c19e9b95e03ad62d6ff7da7"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a3bcdf2f98c19e9b95e03ad62d6ff7da7">gridfire::reaction::LogicalReactionSet::size</a></div><div class="ttdeci">size_t size() const</div><div class="ttdoc">Gets the number of logical reactions in the set.</div><div class="ttdef"><b>Definition</b> <a href="#l00583">reaction.h:583</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_a49280e0f29d2d4e322d76831688f7f27"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a49280e0f29d2d4e322d76831688f7f27">gridfire::reaction::LogicalReactionSet::m_reactionNameMap</a></div><div class="ttdeci">std::unordered_map< std::string, LogicalReaction > m_reactionNameMap</div><div class="ttdoc">Maps reaction IDs to LogicalReaction objects for quick lookup.</div><div class="ttdef"><b>Definition</b> <a href="#l00595">reaction.h:595</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_a70b669622690196e68eedfd2a8fd6318"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a70b669622690196e68eedfd2a8fd6318">gridfire::reaction::LogicalReactionSet::end</a></div><div class="ttdeci">auto end() const</div><div class="ttdef"><b>Definition</b> <a href="#l00576">reaction.h:576</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_a7e21865d3dafb65d2bf3b051ee55c4c2"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a7e21865d3dafb65d2bf3b051ee55c4c2">gridfire::reaction::LogicalReactionSet::m_id</a></div><div class="ttdeci">std::string m_id</div><div class="ttdef"><b>Definition</b> <a href="#l00594">reaction.h:594</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_a9707407faf8efd3f4da745a54d3fa9e2"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#a9707407faf8efd3f4da745a54d3fa9e2">gridfire::reaction::LogicalReactionSet::end</a></div><div class="ttdeci">auto end()</div><div class="ttdef"><b>Definition</b> <a href="#l00575">reaction.h:575</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_ac650a2a2c83cfb618f11a924552e251d"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ac650a2a2c83cfb618f11a924552e251d">gridfire::reaction::LogicalReactionSet::LogicalReactionSet</a></div><div class="ttdeci">LogicalReactionSet()=delete</div><div class="ttdoc">Deleted default constructor.</div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_ad5c1f6a1642c47437dbf8cc20a32b51e"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#ad5c1f6a1642c47437dbf8cc20a32b51e">gridfire::reaction::LogicalReactionSet::m_logger</a></div><div class="ttdeci">quill::Logger * m_logger</div><div class="ttdef"><b>Definition</b> <a href="#l00592">reaction.h:592</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_logical_reaction_set_html_afeed26abc72e5c529a76c1da41edfa67"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_logical_reaction_set.html#afeed26abc72e5c529a76c1da41edfa67">gridfire::reaction::LogicalReactionSet::begin</a></div><div class="ttdeci">auto begin()</div><div class="ttdef"><b>Definition</b> <a href="#l00573">reaction.h:573</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html">gridfire::reaction::Reaction</a></div><div class="ttdoc">Represents a single nuclear reaction from a specific data source.</div><div class="ttdef"><b>Definition</b> <a href="#l00071">reaction.h:71</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a0185c6be5465d113f25e00aee1297cd6"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a0185c6be5465d113f25e00aee1297cd6">gridfire::reaction::Reaction::m_sourceLabel</a></div><div class="ttdeci">std::string m_sourceLabel</div><div class="ttdoc">Source label for the rate data (e.g., "wc12w", "st08").</div><div class="ttdef"><b>Definition</b> <a href="#l00263">reaction.h:263</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a01c67726efbaa2ff8e4d6f2c965f485c"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a01c67726efbaa2ff8e4d6f2c965f485c">gridfire::reaction::Reaction::product_species</a></div><div class="ttdeci">std::unordered_set< fourdst::atomic::Species > product_species() const</div><div class="ttdoc">Gets a set of all unique product species.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00085">reaction.cpp:85</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a074d3cd2421fd5d0133e47f0522403e2"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a074d3cd2421fd5d0133e47f0522403e2">gridfire::reaction::Reaction::contains_product</a></div><div class="ttdeci">bool contains_product(const fourdst::atomic::Species &species) const</div><div class="ttdoc">Checks if the reaction involves a given species as a product.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00061">reaction.cpp:61</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a084c38181408ed5e6fa2a2dd4d0ec905"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a084c38181408ed5e6fa2a2dd4d0ec905">gridfire::reaction::Reaction::id</a></div><div class="ttdeci">std::string_view id() const</div><div class="ttdoc">Gets the unique identifier of the reaction.</div><div class="ttdef"><b>Definition</b> <a href="#l00201">reaction.h:201</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a0b0b9ac498080aae91ffd466d1ae85a9"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a0b0b9ac498080aae91ffd466d1ae85a9">gridfire::reaction::Reaction::m_reverse</a></div><div class="ttdeci">bool m_reverse</div><div class="ttdoc">Flag indicating if this is a reverse reaction rate.</div><div class="ttdef"><b>Definition</b> <a href="#l00265">reaction.h:265</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a0b543e9b0bb4a21efe4b29780d9bdf5b"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a0b543e9b0bb4a21efe4b29780d9bdf5b">gridfire::reaction::Reaction::reactants</a></div><div class="ttdeci">const std::vector< fourdst::atomic::Species > & reactants() const</div><div class="ttdoc">Gets the vector of reactant species.</div><div class="ttdef"><b>Definition</b> <a href="#l00213">reaction.h:213</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a16f9cbb6269817099d3dc07d4e63da7b"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a16f9cbb6269817099d3dc07d4e63da7b">gridfire::reaction::Reaction::m_chapter</a></div><div class="ttdeci">int m_chapter</div><div class="ttdoc">Chapter number from the REACLIB database, defining the reaction structure.</div><div class="ttdef"><b>Definition</b> <a href="#l00259">reaction.h:259</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a1d3c8ab6d55155f9a21ad80ed8b9ef97"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a1d3c8ab6d55155f9a21ad80ed8b9ef97">gridfire::reaction::Reaction::num_species</a></div><div class="ttdeci">size_t num_species() const</div><div class="ttdoc">Gets the number of unique species involved in the reaction.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00108">reaction.cpp:108</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a2f1c115a99bc7c477a2e858ff18b1b51"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a2f1c115a99bc7c477a2e858ff18b1b51">gridfire::reaction::Reaction::operator!=</a></div><div class="ttdeci">bool operator!=(const Reaction &other) const</div><div class="ttdoc">Compares this reaction with another for inequality.</div><div class="ttdef"><b>Definition</b> <a href="#l00245">reaction.h:245</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a410e2ab0784ad751f82bbe55be603db0"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a410e2ab0784ad751f82bbe55be603db0">gridfire::reaction::Reaction::sourceLabel</a></div><div class="ttdeci">std::string_view sourceLabel() const</div><div class="ttdoc">Gets the source label for the rate data.</div><div class="ttdef"><b>Definition</b> <a href="#l00131">reaction.h:131</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a4b5607ed413acdf29539b8a57461e49e"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a4b5607ed413acdf29539b8a57461e49e">gridfire::reaction::Reaction::m_products</a></div><div class="ttdeci">std::vector< fourdst::atomic::Species > m_products</div><div class="ttdoc">Products of the reaction.</div><div class="ttdef"><b>Definition</b> <a href="#l00262">reaction.h:262</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a59122a2898bb9af640cc3e9aeb49028b"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a59122a2898bb9af640cc3e9aeb49028b">gridfire::reaction::Reaction::m_qValue</a></div><div class="ttdeci">double m_qValue</div><div class="ttdoc">Q-value of the reaction in MeV.</div><div class="ttdef"><b>Definition</b> <a href="#l00260">reaction.h:260</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a5c685e5a736b51799e5b9f6746c4126b"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a5c685e5a736b51799e5b9f6746c4126b">gridfire::reaction::Reaction::m_id</a></div><div class="ttdeci">std::string m_id</div><div class="ttdoc">Unique identifier for the reaction (e.g., "h1+h1=>h2+e+nu").</div><div class="ttdef"><b>Definition</b> <a href="#l00257">reaction.h:257</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a5cb438adfefb640e4bc58e09053bd629"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a5cb438adfefb640e4bc58e09053bd629">gridfire::reaction::Reaction::chapter</a></div><div class="ttdeci">int chapter() const</div><div class="ttdoc">Gets the REACLIB chapter number.</div><div class="ttdef"><b>Definition</b> <a href="#l00125">reaction.h:125</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a6124aa9fc2306349e1dd879a37923248"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a6124aa9fc2306349e1dd879a37923248">gridfire::reaction::Reaction::m_peName</a></div><div class="ttdeci">std::string m_peName</div><div class="ttdoc">Name of the reaction in (projectile, ejectile) notation (e.g. "p(p,g)d").</div><div class="ttdef"><b>Definition</b> <a href="#l00258">reaction.h:258</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a648b9ed6108bed2469dc028fb7e351af"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a648b9ed6108bed2469dc028fb7e351af">gridfire::reaction::Reaction::calculate_rate</a></div><div class="ttdeci">T calculate_rate(const T T9) const</div><div class="ttdoc">Template implementation for calculating the reaction rate.</div><div class="ttdef"><b>Definition</b> <a href="#l00276">reaction.h:276</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a6e2ff61b9e8409f2a561663628b8ce02"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a6e2ff61b9e8409f2a561663628b8ce02">gridfire::reaction::Reaction::products</a></div><div class="ttdeci">const std::vector< fourdst::atomic::Species > & products() const</div><div class="ttdoc">Gets the vector of product species.</div><div class="ttdef"><b>Definition</b> <a href="#l00219">reaction.h:219</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a7044d0a1d59d85502ce554e4ec2167e4"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a7044d0a1d59d85502ce554e4ec2167e4">gridfire::reaction::Reaction::m_logger</a></div><div class="ttdeci">quill::Logger * m_logger</div><div class="ttdef"><b>Definition</b> <a href="#l00256">reaction.h:256</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a78f42664cc957e266b6cf15fda09be97"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a78f42664cc957e266b6cf15fda09be97">gridfire::reaction::Reaction::peName</a></div><div class="ttdeci">virtual std::string_view peName() const</div><div class="ttdoc">Gets the reaction name in (projectile, ejectile) notation.</div><div class="ttdef"><b>Definition</b> <a href="#l00119">reaction.h:119</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a7dc8fda87e0581fde6da0a81cf4d7224"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a7dc8fda87e0581fde6da0a81cf4d7224">gridfire::reaction::Reaction::all_species</a></div><div class="ttdeci">std::unordered_set< fourdst::atomic::Species > all_species() const</div><div class="ttdoc">Gets a set of all unique species involved in the reaction.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00070">reaction.cpp:70</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a7dff19d387e771d96c26e98d75ee9d5c"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a7dff19d387e771d96c26e98d75ee9d5c">gridfire::reaction::Reaction::Reaction</a></div><div class="ttdeci">Reaction(const std::string_view id, const std::string_view peName, const int chapter, const std::vector< fourdst::atomic::Species > &reactants, const std::vector< fourdst::atomic::Species > &products, const double qValue, const std::string_view label, const RateCoefficientSet &sets, const bool reverse=false)</div><div class="ttdoc">Constructs a Reaction object.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00019">reaction.cpp:19</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a855ea65e4b62fb0cddc550424a4bc923"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a855ea65e4b62fb0cddc550424a4bc923">gridfire::reaction::Reaction::reactant_species</a></div><div class="ttdeci">std::unordered_set< fourdst::atomic::Species > reactant_species() const</div><div class="ttdoc">Gets a set of all unique reactant species.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00077">reaction.cpp:77</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a85968076e686e67763f4fdf4f72a892e"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a85968076e686e67763f4fdf4f72a892e">gridfire::reaction::Reaction::rateCoefficients</a></div><div class="ttdeci">const RateCoefficientSet & rateCoefficients() const</div><div class="ttdoc">Gets the set of rate coefficients.</div><div class="ttdef"><b>Definition</b> <a href="#l00137">reaction.h:137</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_a87a065b3c7806bcdb5eadb7de2978a11"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#a87a065b3c7806bcdb5eadb7de2978a11">gridfire::reaction::Reaction::m_reactants</a></div><div class="ttdeci">std::vector< fourdst::atomic::Species > m_reactants</div><div class="ttdoc">Reactants of the reaction.</div><div class="ttdef"><b>Definition</b> <a href="#l00261">reaction.h:261</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_aa1d71e38fc55ae691dbb9ec459a612a5"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#aa1d71e38fc55ae691dbb9ec459a612a5">gridfire::reaction::Reaction::excess_energy</a></div><div class="ttdeci">double excess_energy() const</div><div class="ttdoc">Calculates the excess energy from the mass difference of reactants and products.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00123">reaction.cpp:123</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_aa61a9a024d7c4ff66a351ccd0277ec72"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#aa61a9a024d7c4ff66a351ccd0277ec72">gridfire::reaction::Reaction::m_rateCoefficients</a></div><div class="ttdeci">RateCoefficientSet m_rateCoefficients</div><div class="ttdoc">The seven rate coefficients.</div><div class="ttdef"><b>Definition</b> <a href="#l00264">reaction.h:264</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_aa67d05dfabf007c1acad34052d9a1dba"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#aa67d05dfabf007c1acad34052d9a1dba">gridfire::reaction::Reaction::is_reverse</a></div><div class="ttdeci">bool is_reverse() const</div><div class="ttdoc">Checks if this is a reverse reaction rate.</div><div class="ttdef"><b>Definition</b> <a href="#l00225">reaction.h:225</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_aaf0c94db6536b4a9ac1ec08a5c8f01ac"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#aaf0c94db6536b4a9ac1ec08a5c8f01ac">gridfire::reaction::Reaction::stoichiometry</a></div><div class="ttdeci">int stoichiometry(const fourdst::atomic::Species &species) const</div><div class="ttdoc">Calculates the stoichiometric coefficient for a given species.</div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_ab1860df84843be70f97469761e11ab6a"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#ab1860df84843be70f97469761e11ab6a">gridfire::reaction::Reaction::~Reaction</a></div><div class="ttdeci">virtual ~Reaction()=default</div><div class="ttdoc">Virtual destructor.</div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_ab92785f331a446e51a0960b75d60b37b"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#ab92785f331a446e51a0960b75d60b37b">gridfire::reaction::Reaction::contains</a></div><div class="ttdeci">bool contains(const fourdst::atomic::Species &species) const</div><div class="ttdoc">Checks if the reaction involves a given species as a reactant or product.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00047">reaction.cpp:47</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_abbe243affa61ba9b2cd2a7b905cd5e45"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#abbe243affa61ba9b2cd2a7b905cd5e45">gridfire::reaction::Reaction::contains_reactant</a></div><div class="ttdeci">bool contains_reactant(const fourdst::atomic::Species &species) const</div><div class="ttdoc">Checks if the reaction involves a given species as a reactant.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00052">reaction.cpp:52</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_abda0b4e4313e6d4ba57acf37d5976fb8"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#abda0b4e4313e6d4ba57acf37d5976fb8">gridfire::reaction::Reaction::qValue</a></div><div class="ttdeci">double qValue() const</div><div class="ttdoc">Gets the Q-value of the reaction.</div><div class="ttdef"><b>Definition</b> <a href="#l00207">reaction.h:207</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_ac426457cf0a54a15b206549422083bac"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#ac426457cf0a54a15b206549422083bac">gridfire::reaction::Reaction::operator==</a></div><div class="ttdeci">bool operator==(const Reaction &other) const</div><div class="ttdoc">Compares this reaction with another for equality based on their IDs.</div><div class="ttdef"><b>Definition</b> <a href="#l00238">reaction.h:238</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_ad359c06d7196c1a7a955a7b66a51dbe3"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#ad359c06d7196c1a7a955a7b66a51dbe3">gridfire::reaction::Reaction::stoichiometry</a></div><div class="ttdeci">std::unordered_map< fourdst::atomic::Species, int > stoichiometry() const</div><div class="ttdoc">Gets a map of all species to their stoichiometric coefficients.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00112">reaction.cpp:112</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_ad81e9b2a1773470059ca6989c60556ec"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#ad81e9b2a1773470059ca6989c60556ec">gridfire::reaction::Reaction::calculate_rate</a></div><div class="ttdeci">virtual double calculate_rate(const double T9) const</div><div class="ttdoc">Calculates the reaction rate for a given temperature.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00039">reaction.cpp:39</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_html_af6c20e6d03a2d9f87632f71a90b88cb5"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction.html#af6c20e6d03a2d9f87632f71a90b88cb5">gridfire::reaction::Reaction::hash</a></div><div class="ttdeci">uint64_t hash(uint64_t seed=0) const</div><div class="ttdoc">Computes a hash for the reaction based on its ID.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00136">reaction.cpp:136</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html">gridfire::reaction::ReactionSet</a></div><div class="ttdoc">A collection of Reaction objects.</div><div class="ttdef"><b>Definition</b> <a href="#l00307">reaction.h:307</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a1177193b1e46b4e5be630028883ab8dd"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a1177193b1e46b4e5be630028883ab8dd">gridfire::reaction::ReactionSet::remove_reaction</a></div><div class="ttdeci">virtual void remove_reaction(const Reaction &reaction)</div><div class="ttdoc">Removes a reaction from the set.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00181">reaction.cpp:181</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a228f2a00f46a6ee01be887490a722613"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a228f2a00f46a6ee01be887490a722613">gridfire::reaction::ReactionSet::begin</a></div><div class="ttdeci">auto begin()</div><div class="ttdef"><b>Definition</b> <a href="#l00435">reaction.h:435</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a256998eddf292f744d51cdc3e178d4c2"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a256998eddf292f744d51cdc3e178d4c2">gridfire::reaction::ReactionSet::contains_reactant</a></div><div class="ttdeci">bool contains_reactant(const fourdst::atomic::Species &species) const</div><div class="ttdoc">Checks if any reaction in the set contains the given species as a reactant.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00225">reaction.cpp:225</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a3209bb7c2a41deabaab059f6c671776f"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a3209bb7c2a41deabaab059f6c671776f">gridfire::reaction::ReactionSet::hash</a></div><div class="ttdeci">uint64_t hash(uint64_t seed=0) const</div><div class="ttdoc">Computes a hash for the entire set.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00270">reaction.cpp:270</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a4057f74ae647b691f4f61f150553c52b"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a4057f74ae647b691f4f61f150553c52b">gridfire::reaction::ReactionSet::operator[]</a></div><div class="ttdeci">virtual const Reaction & operator[](size_t index) const</div><div class="ttdoc">Accesses a reaction by its index.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00243">reaction.cpp:243</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a436f9c4b8f8a4e115b19728d57d8e105"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a436f9c4b8f8a4e115b19728d57d8e105">gridfire::reaction::ReactionSet::end</a></div><div class="ttdeci">auto end() const</div><div class="ttdef"><b>Definition</b> <a href="#l00438">reaction.h:438</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a4bdf50219d686a6cbc0b3cc5365dc18e"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a4bdf50219d686a6cbc0b3cc5365dc18e">gridfire::reaction::ReactionSet::contains_product</a></div><div class="ttdeci">bool contains_product(const fourdst::atomic::Species &species) const</div><div class="ttdoc">Checks if any reaction in the set contains the given species as a product.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00234">reaction.cpp:234</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a4e572e823a80b905e7d002b612123135"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a4e572e823a80b905e7d002b612123135">gridfire::reaction::ReactionSet::operator==</a></div><div class="ttdeci">bool operator==(const ReactionSet &other) const</div><div class="ttdoc">Compares this set with another for equality.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00259">reaction.cpp:259</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a529189f464aebc6b5ac5c717f70e14b8"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a529189f464aebc6b5ac5c717f70e14b8">gridfire::reaction::ReactionSet::operator!=</a></div><div class="ttdeci">bool operator!=(const ReactionSet &other) const</div><div class="ttdoc">Compares this set with another for inequality.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00266">reaction.cpp:266</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a5b872a8519740a6d06cfaed03784826a"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a5b872a8519740a6d06cfaed03784826a">gridfire::reaction::ReactionSet::contains_species</a></div><div class="ttdeci">bool contains_species(const fourdst::atomic::Species &species) const</div><div class="ttdoc">Checks if any reaction in the set involves the given species.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00216">reaction.cpp:216</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a64ca23fc5bdc41b868c3fbeb5aef6d98"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a64ca23fc5bdc41b868c3fbeb5aef6d98">gridfire::reaction::ReactionSet::~ReactionSet</a></div><div class="ttdeci">virtual ~ReactionSet()=default</div><div class="ttdoc">Virtual destructor.</div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_a6b07a81a3500e4e91d3bcd336b66e35d"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#a6b07a81a3500e4e91d3bcd336b66e35d">gridfire::reaction::ReactionSet::size</a></div><div class="ttdeci">virtual size_t size() const</div><div class="ttdoc">Gets the number of reactions in the set.</div><div class="ttdef"><b>Definition</b> <a href="#l00363">reaction.h:363</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_aa8e0d65aafc6e0320690b4906e1bf300"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#aa8e0d65aafc6e0320690b4906e1bf300">gridfire::reaction::ReactionSet::clear</a></div><div class="ttdeci">void clear()</div><div class="ttdoc">Removes all reactions from the set.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00211">reaction.cpp:211</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_aaa3c40cb22b8bd056cf62b047ae4937c"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#aaa3c40cb22b8bd056cf62b047ae4937c">gridfire::reaction::ReactionSet::m_reactions</a></div><div class="ttdeci">std::vector< Reaction > m_reactions</div><div class="ttdef"><b>Definition</b> <a href="#l00442">reaction.h:442</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_aac890bf7fdf689890d765ff67489520a"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#aac890bf7fdf689890d765ff67489520a">gridfire::reaction::ReactionSet::operator=</a></div><div class="ttdeci">ReactionSet & operator=(const ReactionSet &other)</div><div class="ttdoc">Copy assignment operator.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00166">reaction.cpp:166</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_abae9fbc4b4306479a6cd3173ac628987"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#abae9fbc4b4306479a6cd3173ac628987">gridfire::reaction::ReactionSet::end</a></div><div class="ttdeci">auto end()</div><div class="ttdef"><b>Definition</b> <a href="#l00437">reaction.h:437</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_acea41c2ffb010e46bc5cf56f5f244fac"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#acea41c2ffb010e46bc5cf56f5f244fac">gridfire::reaction::ReactionSet::add_reaction</a></div><div class="ttdeci">virtual void add_reaction(Reaction reaction)</div><div class="ttdoc">Adds a reaction to the set.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00175">reaction.cpp:175</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_ad3e2715e9e4d6b4f1dc54b969a1322f4"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#ad3e2715e9e4d6b4f1dc54b969a1322f4">gridfire::reaction::ReactionSet::m_reactionNameMap</a></div><div class="ttdeci">std::unordered_map< std::string, Reaction > m_reactionNameMap</div><div class="ttdoc">Maps reaction IDs to Reaction objects for quick lookup.</div><div class="ttdef"><b>Definition</b> <a href="#l00444">reaction.h:444</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_adb73fe9ff0178359409e2bea46a620c2"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#adb73fe9ff0178359409e2bea46a620c2">gridfire::reaction::ReactionSet::begin</a></div><div class="ttdeci">auto begin() const</div><div class="ttdef"><b>Definition</b> <a href="#l00436">reaction.h:436</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_ae5f8078e77a700a8356487fbd69ba387"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#ae5f8078e77a700a8356487fbd69ba387">gridfire::reaction::ReactionSet::contains</a></div><div class="ttdeci">bool contains(const std::string_view &id) const</div><div class="ttdoc">Checks if the set contains a reaction with the given ID.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00193">reaction.cpp:193</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_af92e3003b2a3606b48ab857cdedc3111"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#af92e3003b2a3606b48ab857cdedc3111">gridfire::reaction::ReactionSet::m_id</a></div><div class="ttdeci">std::string m_id</div><div class="ttdef"><b>Definition</b> <a href="#l00443">reaction.h:443</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_afc40e3783576867229fad3115b3d39d3"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#afc40e3783576867229fad3115b3d39d3">gridfire::reaction::ReactionSet::ReactionSet</a></div><div class="ttdeci">ReactionSet(std::vector< Reaction > reactions)</div><div class="ttdoc">Constructs a ReactionSet from a vector of reactions.</div><div class="ttdef"><b>Definition</b> <a href="reaction_8cpp_source.html#l00140">reaction.cpp:140</a></div></div>
|
||||
<div class="ttc" id="aclassgridfire_1_1reaction_1_1_reaction_set_html_aff5ae284012009164d4b3033577709eb"><div class="ttname"><a href="classgridfire_1_1reaction_1_1_reaction_set.html#aff5ae284012009164d4b3033577709eb">gridfire::reaction::ReactionSet::m_logger</a></div><div class="ttdeci">quill::Logger * m_logger</div><div class="ttdef"><b>Definition</b> <a href="#l00441">reaction.h:441</a></div></div>
|
||||
<div class="ttc" id="anamespacegridfire_1_1reaction_html"><div class="ttname"><a href="namespacegridfire_1_1reaction.html">gridfire::reaction</a></div><div class="ttdef"><b>Definition</b> <a href="#l00024">reaction.h:24</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html">gridfire::reaction::RateCoefficientSet</a></div><div class="ttdoc">Holds the seven coefficients for the REACLIB rate equation.</div><div class="ttdef"><b>Definition</b> <a href="#l00032">reaction.h:32</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html_a2a9316d19bc2e8bf0a7872eb6fe8a53f"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a2a9316d19bc2e8bf0a7872eb6fe8a53f">gridfire::reaction::RateCoefficientSet::a2</a></div><div class="ttdeci">double a2</div><div class="ttdoc">Coefficient a2.</div><div class="ttdef"><b>Definition</b> <a href="#l00035">reaction.h:35</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html_a2fa6b65e300dcd181222b743c2b3d6ed"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a2fa6b65e300dcd181222b743c2b3d6ed">gridfire::reaction::RateCoefficientSet::a0</a></div><div class="ttdeci">double a0</div><div class="ttdoc">Coefficient a0.</div><div class="ttdef"><b>Definition</b> <a href="#l00033">reaction.h:33</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html_a31a92f95a27e4430209dfc2bdfa5c40f"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a31a92f95a27e4430209dfc2bdfa5c40f">gridfire::reaction::RateCoefficientSet::operator<<</a></div><div class="ttdeci">friend std::ostream & operator<<(std::ostream &os, const RateCoefficientSet &r)</div><div class="ttdoc">Overloads the stream insertion operator for easy printing.</div><div class="ttdef"><b>Definition</b> <a href="#l00047">reaction.h:47</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html_a3d047485ebb57d6c763adfe4aae493b1"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a3d047485ebb57d6c763adfe4aae493b1">gridfire::reaction::RateCoefficientSet::a3</a></div><div class="ttdeci">double a3</div><div class="ttdoc">Coefficient a3.</div><div class="ttdef"><b>Definition</b> <a href="#l00036">reaction.h:36</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html_a8c79db4e649b4eb1d29c43ebe4e95458"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#a8c79db4e649b4eb1d29c43ebe4e95458">gridfire::reaction::RateCoefficientSet::a5</a></div><div class="ttdeci">double a5</div><div class="ttdoc">Coefficient a5.</div><div class="ttdef"><b>Definition</b> <a href="#l00038">reaction.h:38</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html_ace9dbd928e179784e47eaa108ce8d721"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#ace9dbd928e179784e47eaa108ce8d721">gridfire::reaction::RateCoefficientSet::a1</a></div><div class="ttdeci">double a1</div><div class="ttdoc">Coefficient a1.</div><div class="ttdef"><b>Definition</b> <a href="#l00034">reaction.h:34</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html_adf8e6ed7f91cb9e15d1469a808b1877a"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#adf8e6ed7f91cb9e15d1469a808b1877a">gridfire::reaction::RateCoefficientSet::a6</a></div><div class="ttdeci">double a6</div><div class="ttdoc">Coefficient a6.</div><div class="ttdef"><b>Definition</b> <a href="#l00039">reaction.h:39</a></div></div>
|
||||
<div class="ttc" id="astructgridfire_1_1reaction_1_1_rate_coefficient_set_html_ae57b2eac71cb4ed9947f40c9cb8fc3ca"><div class="ttname"><a href="structgridfire_1_1reaction_1_1_rate_coefficient_set.html#ae57b2eac71cb4ed9947f40c9cb8fc3ca">gridfire::reaction::RateCoefficientSet::a4</a></div><div class="ttdeci">double a4</div><div class="ttdoc">Coefficient a4.</div><div class="ttdef"><b>Definition</b> <a href="#l00037">reaction.h:37</a></div></div>
|
||||
</div><!-- fragment --></div><!-- contents -->
|
||||
</div><!-- doc-content -->
|
||||
<!-- start footer part -->
|
||||
<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
|
||||
<ul>
|
||||
<li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_fc4c7f03e1a69a98c370fae55a743828.html">network</a></li><li class="navelem"><a class="el" href="dir_5cccfa813acdf3744b542715860d37b2.html">include</a></li><li class="navelem"><a class="el" href="dir_2a1262ef5950eb718393488a3eb5aa9f.html">gridfire</a></li><li class="navelem"><a class="el" href="dir_3c60707488650cd3ec07ac1739eb797f.html">reaction</a></li><li class="navelem"><a class="el" href="reaction_8h.html">reaction.h</a></li>
|
||||
<li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
|
||||
</ul>
|
||||
</div>
|
||||
</body>
|
||||
</html>
|
||||
Reference in New Issue
Block a user