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docs(docs): rebuilt docs with loads more detail for triggers and weak reactions

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Emily Boudreaux
2025-10-08 11:17:09 -04:00
parent 8a0b5b2c36
commit 274c566726
600 changed files with 39207 additions and 9125 deletions
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docs/html/class_py_dynamic_engine.js
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@@ -7,18 +7,18 @@ var class_py_dynamic_engine =
[ "generateStoichiometryMatrix", "class_py_dynamic_engine.html#a2066649ca11a869c054079ea12d8d0e9", null ],
[ "getDepth", "class_py_dynamic_engine.html#adba68716d832b6100e08d32fbc36f13c", null ],
[ "getJacobianMatrixEntry", "class_py_dynamic_engine.html#a1c888bbc0618f1ae02d9a53e45f3c159", null ],
[ "getNetworkReactions", "class_py_dynamic_engine.html#a5988cfba247631ba6c00795cafda9a38", null ],
[ "getNetworkReactions", "class_py_dynamic_engine.html#a1d5143640666631501cf229bc491516e", null ],
[ "getNetworkSpecies", "class_py_dynamic_engine.html#afc745e7ab5da5d8b3cf916044515cd7d", null ],
[ "getScreeningModel", "class_py_dynamic_engine.html#ab4cfdca5e15957c5cef75ffa6dedeee5", null ],
[ "getSpeciesDestructionTimescales", "class_py_dynamic_engine.html#a020044829e0146427ed4830e5b02c4f3", null ],
[ "getSpeciesIndex", "class_py_dynamic_engine.html#a2ee1d745c1c21b9fcb652c96c42f1091", null ],
[ "getSpeciesIndex", "class_py_dynamic_engine.html#a95d10a7b240d543a1bc6c67ddf2dc8e0", null ],
[ "getSpeciesTimescales", "class_py_dynamic_engine.html#a02a4c86c9637a3c9c9ca8ddd82ecff22", null ],
[ "getStoichiometryMatrixEntry", "class_py_dynamic_engine.html#ab48ef6db18da20024aa563a91fa16f83", null ],
[ "isStale", "class_py_dynamic_engine.html#a55bf19ed7534a312a36faf74753f7b14", null ],
[ "mapNetInToMolarAbundanceVector", "class_py_dynamic_engine.html#a61bb4b430fe740cfb2c24e5cc673e4ac", null ],
[ "primeEngine", "class_py_dynamic_engine.html#ac22a10412be6649bf379e6d61113c878", null ],
[ "rebuild", "class_py_dynamic_engine.html#a3d30a9116825ab2c5c209bc2712126bc", null ],
[ "setNetworkReactions", "class_py_dynamic_engine.html#afd818c408c64d207e71b1a90426328d6", null ],
[ "setNetworkReactions", "class_py_dynamic_engine.html#af469cba3be850d53f659ec173f0eb4e4", null ],
[ "setScreeningModel", "class_py_dynamic_engine.html#afa3abfd612033336a656f092721c14ac", null ],
[ "update", "class_py_dynamic_engine.html#af8e6a8cd44f278535d7bcc9a896d6da8", null ],
[ "m_species_cache", "class_py_dynamic_engine.html#a2246382b1c98ba69cdb419bba63a6d03", null ]