2025-07-01 07:24:18 -04:00
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
< html xmlns = "http://www.w3.org/1999/xhtml" lang = "en-US" >
< head >
< meta http-equiv = "Content-Type" content = "text/xhtml;charset=UTF-8" / >
< meta http-equiv = "X-UA-Compatible" content = "IE=11" / >
< meta name = "generator" content = "Doxygen 1.13.2" / >
< meta name = "viewport" content = "width=device-width, initial-scale=1" / >
< title > GridFire: Class Members< / title >
< link href = "tabs.css" rel = "stylesheet" type = "text/css" / >
< script type = "text/javascript" src = "jquery.js" > < / script >
< script type = "text/javascript" src = "dynsections.js" > < / script >
< script type = "text/javascript" src = "clipboard.js" > < / script >
< link href = "navtree.css" rel = "stylesheet" type = "text/css" / >
< script type = "text/javascript" src = "navtreedata.js" > < / script >
< script type = "text/javascript" src = "navtree.js" > < / script >
< script type = "text/javascript" src = "resize.js" > < / script >
< script type = "text/javascript" src = "cookie.js" > < / script >
< link href = "search/search.css" rel = "stylesheet" type = "text/css" / >
< script type = "text/javascript" src = "search/searchdata.js" > < / script >
< script type = "text/javascript" src = "search/search.js" > < / script >
< link href = "doxygen.css" rel = "stylesheet" type = "text/css" / >
< link href = "doxygen-awesome.css" rel = "stylesheet" type = "text/css" / >
< link href = "doxygen-awesome-sidebar-only.css" rel = "stylesheet" type = "text/css" / >
< / head >
< body >
< div id = "top" > <!-- do not remove this div, it is closed by doxygen! -->
< div id = "titlearea" >
< table cellspacing = "0" cellpadding = "0" >
< tbody >
< tr id = "projectrow" >
< td id = "projectalign" >
< div id = "projectname" > GridFire< span id = "projectnumber" >   0.0.1a< / span >
< / div >
< div id = "projectbrief" > General Purpose Nuclear Network< / div >
< / td >
< / tr >
< / tbody >
< / table >
< / div >
<!-- end header part -->
<!-- Generated by Doxygen 1.13.2 -->
< script type = "text/javascript" >
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699& dn=expat.txt MIT */
var searchBox = new SearchBox("searchBox", "search/",'.html');
/* @license-end */
< / script >
< script type = "text/javascript" >
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699& dn=expat.txt MIT */
$(function() { codefold.init(0); });
/* @license-end */
< / script >
< script type = "text/javascript" src = "menudata.js" > < / script >
< script type = "text/javascript" src = "menu.js" > < / script >
< script type = "text/javascript" >
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699& dn=expat.txt MIT */
$(function() {
initMenu('',true,false,'search.php','Search',true);
$(function() { init_search(); });
});
/* @license-end */
< / script >
< div id = "main-nav" > < / div >
< / div > <!-- top -->
< div id = "side-nav" class = "ui-resizable side-nav-resizable" >
< div id = "nav-tree" >
< div id = "nav-tree-contents" >
< div id = "nav-sync" class = "sync" > < / div >
< / div >
< / div >
< div id = "splitbar" style = "-moz-user-select:none;"
class="ui-resizable-handle">
< / div >
< / div >
< script type = "text/javascript" >
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699& dn=expat.txt MIT */
$(function(){initNavTree('functions_c.html',''); initResizable(true); });
/* @license-end */
< / script >
< div id = "doc-content" >
<!-- window showing the filter options -->
< div id = "MSearchSelectWindow"
onmouseover="return searchBox.OnSearchSelectShow()"
onmouseout="return searchBox.OnSearchSelectHide()"
onkeydown="return searchBox.OnSearchSelectKey(event)">
< / div >
<!-- iframe showing the search results (closed by default) -->
< div id = "MSearchResultsWindow" >
< div id = "MSearchResults" >
< div class = "SRPage" >
< div id = "SRIndex" >
< div id = "SRResults" > < / div >
< div class = "SRStatus" id = "Loading" > Loading...< / div >
< div class = "SRStatus" id = "Searching" > Searching...< / div >
< div class = "SRStatus" id = "NoMatches" > No Matches< / div >
< / div >
< / div >
< / div >
< / div >
< div class = "contents" >
< div class = "textblock" > Here is a list of all class members with links to the classes they belong to:< / div >
< h3 > < a id = "index_c" name = "index_c" > < / a > - c -< / h3 > < ul >
2025-07-01 15:06:22 -04:00
< li > c  :  < a class = "el" href = "structgridfire_1_1_graph_engine_1_1constants.html#a8bea6e348699c1aea93d17bb56739306" > gridfire::GraphEngine::constants< / a > < / li >
2025-07-24 11:10:45 -04:00
< li > calculate_forward_rate_log_derivative()  :  < a class = "el" href = "classgridfire_1_1_reaction.html#a3a8ba9212d76d5ce51f20df6892c6061" > gridfire::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_logical_reaction.html#aa4b8d0d30459f360ff6e29d848e943d5" > gridfire::reaction::LogicalReaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_reaction.html#a3a8ba9212d76d5ce51f20df6892c6061" > gridfire::reaction::Reaction< / a > < / li >
< li > calculate_rate()  :  < a class = "el" href = "classgridfire_1_1_reaction.html#ad81e9b2a1773470059ca6989c60556ec" > gridfire::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_logical_reaction.html#a1d2fb3b6a6a1860ace98b32447d1dd1b" > gridfire::reaction::LogicalReaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_reaction.html#ad81e9b2a1773470059ca6989c60556ec" > gridfire::reaction::Reaction< / a > < / li >
2025-07-01 07:24:18 -04:00
< li > calculateAllDerivatives()  :  < a class = "el" href = "classgridfire_1_1_graph_engine.html#af41df9ce979b6410e12642cb093916c9" > gridfire::GraphEngine< / a > < / li >
2025-07-24 11:10:45 -04:00
< li > calculateAllDerivativesUsingPrecomputation()  :  < a class = "el" href = "classgridfire_1_1_graph_engine.html#a97f98706b51fbe0d167ed81ffe58c438" > gridfire::GraphEngine< / a > < / li >
2025-07-01 11:40:51 -04:00
< li > calculateAllReactionFlows()  :  < a class = "el" href = "classgridfire_1_1_adaptive_engine_view.html#abdbaf4b87629efe43ac1255dad424c0c" > gridfire::AdaptiveEngineView< / a > < / li >
< li > calculateFactors_impl()  :  < a class = "el" href = "classgridfire_1_1screening_1_1_bare_screening_model.html#a6c93b72c8ca34623127f0846d8dee50a" > gridfire::screening::BareScreeningModel< / a > , < a class = "el" href = "classgridfire_1_1screening_1_1_weak_screening_model.html#a2695206d46b9d2c2503f8e58c44df88f" > gridfire::screening::WeakScreeningModel< / a > < / li >
2025-07-24 11:10:45 -04:00
< li > calculateMolarReactionFlow()  :  < a class = "el" href = "classgridfire_1_1_adaptive_engine_view.html#a048d4b1d41ecb4125a558d1b9ed7cb31" > gridfire::AdaptiveEngineView< / a > , < a class = "el" href = "classgridfire_1_1_defined_engine_view.html#a142725470f96cba3edb48a29f1264032" > gridfire::DefinedEngineView< / a > , < a class = "el" href = "classgridfire_1_1_dynamic_engine.html#a6633b1757c41dd9e1c397333f4f9e785" > gridfire::DynamicEngine< / a > , < a class = "el" href = "classgridfire_1_1_graph_engine.html#a9245642b741f215e52861d00e756fb3f" > gridfire::GraphEngine< / a > , < a class = "el" href = "classgridfire_1_1_multiscale_partitioning_engine_view.html#a79eb9c108d694a27ec913ed0143aa044" > gridfire::MultiscalePartitioningEngineView< / a > , < a class = "el" href = "class_py_dynamic_engine.html#a6224f546ba66b1257506b1fc9f47195a" > PyDynamicEngine< / a > < / li >
< li > calculateReverseMolarReactionFlow()  :  < a class = "el" href = "classgridfire_1_1_graph_engine.html#a17774cd9ffcf1ba94019df766a0984a0" > gridfire::GraphEngine< / a > < / li >
< li > calculateReverseRate()  :  < a class = "el" href = "classgridfire_1_1_graph_engine.html#a0b7b85f824e1021ae6e56b644db53b28" > gridfire::GraphEngine< / a > < / li >
< li > calculateReverseRateTwoBody()  :  < a class = "el" href = "classgridfire_1_1_graph_engine.html#a01fc9fd5d576b66d07360d05e821c755" > gridfire::GraphEngine< / a > < / li >
< li > calculateReverseRateTwoBodyDerivative()  :  < a class = "el" href = "classgridfire_1_1_graph_engine.html#af28950c5af3a92eb03a1a64ed0f913e7" > gridfire::GraphEngine< / a > < / li >
< li > calculateRHSAndEnergy()  :  < a class = "el" href = "classgridfire_1_1_adaptive_engine_view.html#af703ad17ea65ffff4b75bf8ccc00e5d5" > gridfire::AdaptiveEngineView< / a > , < a class = "el" href = "classgridfire_1_1_defined_engine_view.html#a4b0d71367cb1d4c06bcd01251bbeb60d" > gridfire::DefinedEngineView< / a > , < a class = "el" href = "classgridfire_1_1_engine.html#a89f714d19b84a93a004a7afbb487a6cb" > gridfire::Engine< / a > , < a class = "el" href = "classgridfire_1_1_graph_engine.html#aaed3743a52246b0f7bf03995e1c12081" > gridfire::GraphEngine< / a > , < a class = "el" href = "classgridfire_1_1_multiscale_partitioning_engine_view.html#a716d7357e944e8394d8b8e0b5e7625eb" > gridfire::MultiscalePartitioningEngineView< / a > , < a class = "el" href = "class_py_dynamic_engine.html#a5b7f0cfe327c634ec125303256de8b9a" > PyDynamicEngine< / a > , < a class = "el" href = "class_py_engine.html#a2f92602ecf210414b46838fc0a9ae26d" > PyEngine< / a > < / li >
< li > calculateScreeningFactors()  :  < a class = "el" href = "classgridfire_1_1screening_1_1_bare_screening_model.html#ac35ad34c5da7e1b5087552aa5c83fe60" > gridfire::screening::BareScreeningModel< / a > , < a class = "el" href = "classgridfire_1_1screening_1_1_screening_model.html#aaec9184d80c86a2d8674e395dad81bde" > gridfire::screening::ScreeningModel< / a > , < a class = "el" href = "classgridfire_1_1screening_1_1_weak_screening_model.html#afbaeaefe6b3ab3ecf81889ddc1cff76c" > gridfire::screening::WeakScreeningModel< / a > , < a class = "el" href = "class_py_screening.html#a2b8756c197eb89e77cb6dd231c979315" > PyScreening< / a > < / li >
< li > chapter  :  < a class = "el" href = "structgridfire_1_1reaclib_1_1_reaction_record.html#a5c853b69a23b0a8c39ab4b55ac3fe3cc" > gridfire::reaclib::ReactionRecord< / a > , < a class = "el" href = "classgridfire_1_1_reaction.html#a5cb438adfefb640e4bc58e09053bd629" > gridfire::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_reaction.html#a5cb438adfefb640e4bc58e09053bd629" > gridfire::reaction::Reaction< / a > < / li >
2025-07-01 11:40:51 -04:00
< li > clear()  :  < a class = "el" href = "classgridfire_1_1reaction_1_1_templated_reaction_set.html#a05f71d318564d880079fd6c96d59ae21" > gridfire::reaction::TemplatedReactionSet< ReactionT > < / a > < / li >
2025-07-24 11:10:45 -04:00
< li > clone()  :  < a class = "el" href = "classgridfire_1_1partition_1_1_composite_partition_function.html#a7b000d55c7d1f489e54a57f7f4e3808a" > gridfire::partition::CompositePartitionFunction< / a > , < a class = "el" href = "classgridfire_1_1partition_1_1_ground_state_partition_function.html#ade2b0f92a3d9b74968166793466a11e4" > gridfire::partition::GroundStatePartitionFunction< / a > , < a class = "el" href = "classgridfire_1_1partition_1_1_partition_function.html#a677a90f992fd56b8718e36655c33ce6d" > gridfire::partition::PartitionFunction< / a > , < a class = "el" href = "classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html#ad229cac0a84df5ebbcaf0550f83debf6" > gridfire::partition::RauscherThielemannPartitionFunction< / a > , < a class = "el" href = "class_py_partition_function.html#af918b357e38fb82499ad53584557c43d" > PyPartitionFunction< / a > < / li >
2025-07-01 07:24:18 -04:00
< li > coeffs  :  < a class = "el" href = "structgridfire_1_1reaclib_1_1_reaction_record.html#a80803f612e574859fde0a163bca84bc0" > gridfire::reaclib::ReactionRecord< / a > < / li >
2025-07-24 11:10:45 -04:00
< li > collect()  :  < a class = "el" href = "classgridfire_1_1_defined_engine_view.html#adbc64284b5f5a3256867be46fa87c69e" > gridfire::DefinedEngineView< / a > < / li >
< li > collectAtomicReverseRateAtomicBases()  :  < a class = "el" href = "classgridfire_1_1_graph_engine.html#a29b338630c959449c15881935ac30746" > gridfire::GraphEngine< / a > < / li >
2025-07-01 07:24:18 -04:00
< li > collectNetworkSpecies()  :  < a class = "el" href = "classgridfire_1_1_graph_engine.html#aedf42d83bfcc28313b6b6454034d2efa" > gridfire::GraphEngine< / a > < / li >
2025-07-24 11:10:45 -04:00
< li > CompositePartitionFunction()  :  < a class = "el" href = "classgridfire_1_1partition_1_1_composite_partition_function.html#ad80743933712de627c6a69d06d42ceb5" > gridfire::partition::CompositePartitionFunction< / a > < / li >
2025-07-01 07:24:18 -04:00
< li > composition  :  < a class = "el" href = "structgridfire_1_1_net_in.html#a13058f4929e72c1187abbebcddb8aed1" > gridfire::NetIn< / a > , < a class = "el" href = "structgridfire_1_1_net_out.html#a073529511ae0e52f868b47cce0e8ac0a" > gridfire::NetOut< / a > < / li >
2025-07-24 11:10:45 -04:00
< li > compute_and_cache()  :  < a class = "el" href = "structgridfire_1_1solver_1_1_direct_network_solver_1_1_r_h_s_manager.html#a595aa16333693ee2bbcac35aa85a1c2a" > gridfire::solver::DirectNetworkSolver::RHSManager< / a > < / li >
2025-07-01 11:40:51 -04:00
< li > Config  :  < a class = "el" href = "classgridfire_1_1_adaptive_engine_view.html#afec39b2faa34ea65c5488dd8e11ba3c3" > gridfire::AdaptiveEngineView< / a > , < a class = "el" href = "classgridfire_1_1_file_defined_engine_view.html#a63f8f85e75ecaab6fa39d48d7a846187" > gridfire::FileDefinedEngineView< / a > , < a class = "el" href = "classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html#af43ad8375abf1cedfdccc296b9958c2b" > gridfire::io::MESANetworkFileParser< / a > , < a class = "el" href = "classgridfire_1_1io_1_1_simple_reaction_list_file_parser.html#ad913155a5a2a36b29e4ce4ca8d71c036" > gridfire::io::SimpleReactionListFileParser< / a > < / li >
2025-07-24 11:10:45 -04:00
< li > constructCandidateGroups()  :  < a class = "el" href = "classgridfire_1_1_multiscale_partitioning_engine_view.html#ac206840057bac65b7f7738e6dfd1047a" > gridfire::MultiscalePartitioningEngineView< / a > < / li >
< li > constructPrimingReactionSet()  :  < a class = "el" href = "classgridfire_1_1_network_priming_engine_view.html#a91f60d8a6bd92dc5d5f6fcda8e89408f" > gridfire::NetworkPrimingEngineView< / a > < / li >
< li > constructReactionIndexMap()  :  < a class = "el" href = "classgridfire_1_1_adaptive_engine_view.html#a89614f4a48f60c4170a0197f45303e7c" > gridfire::AdaptiveEngineView< / a > , < a class = "el" href = "classgridfire_1_1_defined_engine_view.html#ab2514984afaaf8590c28ab71943fbe68" > gridfire::DefinedEngineView< / a > < / li >
< li > constructSpeciesIndexMap()  :  < a class = "el" href = "classgridfire_1_1_adaptive_engine_view.html#a896d29325b4233e83d9298850b617a2d" > gridfire::AdaptiveEngineView< / a > , < a class = "el" href = "classgridfire_1_1_defined_engine_view.html#a9ea4812bc697fe43f8aded14f8aa0985" > gridfire::DefinedEngineView< / a > < / li >
< li > contains()  :  < a class = "el" href = "classgridfire_1_1_reaction.html#ab92785f331a446e51a0960b75d60b37b" > gridfire::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_reaction.html#ab92785f331a446e51a0960b75d60b37b" > gridfire::reaction::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_templated_reaction_set.html#a7777ecd0f594fdf66ce57d22610fad3c" > gridfire::reaction::TemplatedReactionSet< ReactionT > < / a > < / li >
< li > contains_product()  :  < a class = "el" href = "classgridfire_1_1_reaction.html#a074d3cd2421fd5d0133e47f0522403e2" > gridfire::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_reaction.html#a074d3cd2421fd5d0133e47f0522403e2" > gridfire::reaction::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_templated_reaction_set.html#a443ec5d7138764b32975232e13071ccf" > gridfire::reaction::TemplatedReactionSet< ReactionT > < / a > < / li >
< li > contains_reactant()  :  < a class = "el" href = "classgridfire_1_1_reaction.html#abbe243affa61ba9b2cd2a7b905cd5e45" > gridfire::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_reaction.html#abbe243affa61ba9b2cd2a7b905cd5e45" > gridfire::reaction::Reaction< / a > , < a class = "el" href = "classgridfire_1_1reaction_1_1_templated_reaction_set.html#ac42606350d7557106f7954b1f114c128" > gridfire::reaction::TemplatedReactionSet< ReactionT > < / a > < / li >
2025-07-01 11:40:51 -04:00
< li > contains_species()  :  < a class = "el" href = "classgridfire_1_1reaction_1_1_templated_reaction_set.html#ad870856d206d93f27125c88d44ff9e34" > gridfire::reaction::TemplatedReactionSet< ReactionT > < / a > < / li >
2025-07-01 07:24:18 -04:00
< li > convert_netIn()  :  < a class = "el" href = "classgridfire_1_1approx8_1_1_approx8_network.html#a56426da6f1af7eb8a6d1cc70bc8e742a" > gridfire::approx8::Approx8Network< / a > < / li >
< li > culling  :  < a class = "el" href = "structgridfire_1_1_net_in.html#a6a5e909b46094ffa20da9a3da906e43f" > gridfire::NetIn< / a > < / li >
2025-07-01 11:40:51 -04:00
< li > cullReactionsByFlow()  :  < a class = "el" href = "classgridfire_1_1_adaptive_engine_view.html#a42417e96fe9fd623458af109401daf08" > gridfire::AdaptiveEngineView< / a > < / li >
2025-07-01 07:24:18 -04:00
< / ul >
< / div > <!-- contents -->
< / div > <!-- doc - content -->
<!-- start footer part -->
< div id = "nav-path" class = "navpath" > <!-- id is needed for treeview function! -->
< ul >
< li class = "footer" > Generated by < a href = "https://www.doxygen.org/index.html" > < img class = "footer" src = "doxygen.svg" width = "104" height = "31" alt = "doxygen" / > < / a > 1.13.2 < / li >
< / ul >
< / div >
< / body >
< / html >