163 lines
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163 lines
25 KiB
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<div id="projectname">GridFire<span id="projectnumber"> v0.7.1_rc2</span>
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<div id="projectbrief">General Purpose Nuclear Network</div>
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<div class="headertitle"><div class="title">gridfire::engine::FileDefinedEngineView Member List</div></div>
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<p>This is the complete list of members for <a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a>, including all inherited members.</p>
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<table class="directory">
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a2a866a7ba9572d36efab8efe72a063f5">calculateEpsDerivatives</a>(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a2f0ad1febc467bce87b5c6ad29b059fb">calculateMolarReactionFlow</a>(const reaction::Reaction &reaction, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a82cbef591ef1aafcb9a42e01bf38fc38">calculateRHSAndEnergy</a>(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a38191e2b3b219d348eba0109dce271c3">collect</a>(const std::vector< std::string > &peNames)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a25dc44af1a58561b665103b16abe9bbc">collectComposition</a>(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a8d066e95f4cc201cbda90c2aec5d98c4">Config</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a8464c50142f34583201c4abc7fbcba36">constructReactionIndexMap</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a20b54c8b13616982eddb3ae3979b842d">constructSpeciesIndexMap</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#ada2f326789dc8ae8305617c8d700ae05">DefinedEngineView</a>(const std::vector< std::string > &peNames, GraphEngine &baseEngine)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a2ac3834f2d8b916db40fe71c0f070a00">FileDefinedEngineView</a>(GraphEngine &baseEngine, const std::string &fileName, const io::NetworkFileParser &parser)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">explicit</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a4d90439d99da61107d95319b970760bc">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a4966f8cbc859ce2a8a465516d0c0abd0">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const std::vector< fourdst::atomic::Species > &activeSpecies) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a1de5867a0e633de0d0d96ac4fbb141e5">generateJacobianMatrix</a>(const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const SparsityPattern &sparsityPattern) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#af4049e5570bd143d41cab1d4005b6824">generateStoichiometryMatrix</a>() override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#ab6f82ef31b99bfe8a6c4e475bcdb96f8">getBaseEngine</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#ac5a0def6b6af0bd93bf9057c25f048ff">getDepth</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a73fc090d69db6a99d7694c1de8ff46db">getNetworkFile</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a81732c1b2d08451849c1ddf833246892">getNetworkReactions</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a0af3e1ac0314a485171f1dda39929cb4">getNetworkSpecies</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a6f2b445d16ea375ce00d7bd3318fed77">getParser</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a413b111f6a643d7aecbae01dd0f82640">getScreeningModel</a>() const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#ab051d976dbecf325747d54efe7834d04">getSpeciesDestructionTimescales</a>(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#afb3c67ce20746b9acb2766920b8f397b">getSpeciesIndex</a>(const fourdst::atomic::Species &species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a65af092785759559f4697c7e66bef2e3">getSpeciesStatus</a>(const fourdst::atomic::Species &species) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a1edda1a27247480660cf7a63410f5799">getSpeciesTimescales</a>(const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a600dd38a6011089527024f1625130935">getStoichiometryMatrixEntry</a>(const fourdst::atomic::Species &species, const reaction::Reaction &reaction) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a6ef3052fce2d5e4fdaec6659df64c2bc">isStale</a>(const NetIn &netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#af2183aba50db8f91055042425fb84766">LogManager</a> typedef</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#ae8ac4dc44a6c9f3588d6dd02b39a4cc9">m_activeReactions</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#aad986ed7c9602ba042999cf0a30ed70c">m_activeSpecies</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#add093054fe3ba60f99b04f7f3bda4ba3">m_activeSpeciesVectorCache</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">mutable</span><span class="mlabel">private</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a1e46935f049537e675fb132564d6eacd">m_baseEngine</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a6a664b568caf7ec207a10be6a56e52f1">m_config</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a94b66aa4396d98aa78900c2b6bcf0526">m_fileName</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a3156dfef68cd3636f8cf7a13b5388e75">m_isStale</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#af8e65c1eee99938437aa649675182a06">m_logger</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html#a3c438706106a7f1bf27f3015e2a64205">m_parser</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1FileDefinedEngineView.html">gridfire::engine::FileDefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#aa9a26262300b0982b847a72425dc373a">m_reactionIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a26af4be40216ee3ea5b7fff49fe7a00c">m_speciesIndexMap</a></td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a391bc4b5d946ea606cf7661955191d12">mapFullToView</a>(const std::vector< double > &full) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#aa053696a7885b8e42562b2d22ee32d84">mapNetInToMolarAbundanceVector</a>(const NetIn &netIn) const override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#aa352f3ba0e689d3f81711c17f4f67dfc">mapViewToFull</a>(const std::vector< double > &defined) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#afa9aeb6d11645e4b9cecf56fb63b51ef">mapViewToFullReactionIndex</a>(size_t definedReactionIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#ad6986fa5cda1d9ed9d4f54f444f402e8">mapViewToFullSpeciesIndex</a>(size_t definedSpeciesIndex) const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a2bc32a84c9f5372587fca92f2da77595">primeEngine</a>(const NetIn &netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html#a2444b9ed3bc61920ce23c546444269e4">rebuild</a>(const fourdst::composition::CompositionAbstract &comp, BuildDepthType depth)</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DynamicEngine.html">gridfire::engine::DynamicEngine</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#ae89529e13f2b7fd2febcfa5af40d4666">setNetworkReactions</a>(const reaction::ReactionSet &reactions) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a68bd0e51d3e127e5f9fd74fdb8180fd9">setScreeningModel</a>(screening::ScreeningType model) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a1d99b55bf8e94bc2397715aa1f916733">update</a>(const NetIn &netIn) override</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html#a91ea88e43c17f99ff0d95a8f54b09cbf">validateNetworkState</a>() const</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1DefinedEngineView.html">gridfire::engine::DefinedEngineView</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
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<tr class="even"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1Engine.html#af0ea99416c28933d364a872fc6aff556">~Engine</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1Engine.html">gridfire::engine::Engine</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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<tr class="odd"><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1EngineView.html#a17d63e853d6efca31064e9147c80d497">~EngineView</a>()=default</td><td class="entry"><a class="el" href="classgridfire_1_1engine_1_1EngineView.html">gridfire::engine::EngineView< DynamicEngine ></a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
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