2025-07-01 07:24:18 -04:00
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var classgridfire_1_1_graph_engine =
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[
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2025-07-24 11:10:45 -04:00
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[ "AtomicReverseRate", "classgridfire_1_1_graph_engine_1_1_atomic_reverse_rate.html", "classgridfire_1_1_graph_engine_1_1_atomic_reverse_rate" ],
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2025-07-01 15:06:22 -04:00
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[ "constants", "structgridfire_1_1_graph_engine_1_1constants.html", "structgridfire_1_1_graph_engine_1_1constants" ],
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[ "PrecomputedReaction", "structgridfire_1_1_graph_engine_1_1_precomputed_reaction.html", "structgridfire_1_1_graph_engine_1_1_precomputed_reaction" ],
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2025-07-24 11:10:45 -04:00
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[ "GraphEngine", "classgridfire_1_1_graph_engine.html#a39d9838ed40bea71ee6c552bb5969026", null ],
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2025-07-01 15:06:22 -04:00
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[ "GraphEngine", "classgridfire_1_1_graph_engine.html#a1e7e851dfa21d41c2dc533ba56fc4c7b", null ],
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2025-07-01 07:24:18 -04:00
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[ "calculateAllDerivatives", "classgridfire_1_1_graph_engine.html#a71a3d1181b90c3becdc5d9a3da05b9c9", null ],
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[ "calculateAllDerivatives", "classgridfire_1_1_graph_engine.html#aaf4d54e4b774ab8ec8eabec006579d31", null ],
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[ "calculateAllDerivatives", "classgridfire_1_1_graph_engine.html#af41df9ce979b6410e12642cb093916c9", null ],
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2025-07-24 11:10:45 -04:00
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[ "calculateAllDerivativesUsingPrecomputation", "classgridfire_1_1_graph_engine.html#a97f98706b51fbe0d167ed81ffe58c438", null ],
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2025-07-01 07:24:18 -04:00
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[ "calculateMolarReactionFlow", "classgridfire_1_1_graph_engine.html#a5e96b5a0b34c8932f0e14eabda57f1a4", null ],
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2025-07-24 11:10:45 -04:00
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[ "calculateReverseMolarReactionFlow", "classgridfire_1_1_graph_engine.html#a17774cd9ffcf1ba94019df766a0984a0", null ],
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[ "calculateRHSAndEnergy", "classgridfire_1_1_graph_engine.html#aaed3743a52246b0f7bf03995e1c12081", null ],
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[ "collectAtomicReverseRateAtomicBases", "classgridfire_1_1_graph_engine.html#a29b338630c959449c15881935ac30746", null ],
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2025-07-01 07:24:18 -04:00
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[ "collectNetworkSpecies", "classgridfire_1_1_graph_engine.html#aedf42d83bfcc28313b6b6454034d2efa", null ],
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[ "exportToCSV", "classgridfire_1_1_graph_engine.html#a832e2fe066381811a3e0464806ff5e95", null ],
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[ "exportToDot", "classgridfire_1_1_graph_engine.html#adac8c7d62bae76e17fc060e86dadd929", null ],
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2025-07-24 11:10:45 -04:00
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[ "generateJacobianMatrix", "classgridfire_1_1_graph_engine.html#ad049a295e2bb0f3e97b76d5742875119", null ],
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[ "generateJacobianMatrix", "classgridfire_1_1_graph_engine.html#a9687eef88c97eeb7f8680acb230f8ac1", null ],
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2025-07-01 07:24:18 -04:00
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2025-07-24 11:10:45 -04:00
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2025-07-01 07:24:18 -04:00
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[ "getNetworkReactions", "classgridfire_1_1_graph_engine.html#ad45650d10fc5dff1673ae3f806d067da", null ],
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[ "getNetworkSpecies", "classgridfire_1_1_graph_engine.html#a0ed390f3e598ebba4e245ac90bb78767", null ],
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2025-07-24 11:10:45 -04:00
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[ "getPartitionFunction", "classgridfire_1_1_graph_engine.html#add98ece49ec5c538bddf3cc77004fe44", null ],
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2025-07-01 11:40:51 -04:00
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[ "getScreeningModel", "classgridfire_1_1_graph_engine.html#a697f2004e0d02c59e83c7890742d7c9a", null ],
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2025-07-24 11:10:45 -04:00
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[ "getSpeciesDestructionTimescales", "classgridfire_1_1_graph_engine.html#aef8f6bde24d27345067b71084330c7da", null ],
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[ "getSpeciesIndex", "classgridfire_1_1_graph_engine.html#a914f6abc61805cddaebcb8f3cf470dda", null ],
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[ "getSpeciesTimescales", "classgridfire_1_1_graph_engine.html#a65f9f33cddb0bbd1da7c9d0cff23d581", null ],
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2025-07-01 07:24:18 -04:00
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[ "getStoichiometryMatrixEntry", "classgridfire_1_1_graph_engine.html#a6b5feaf788bade212b7c8df7ac8c8152", null ],
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[ "involvesSpecies", "classgridfire_1_1_graph_engine.html#aa6202cee0c3c481eda77cc9a91bc126b", null ],
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2025-07-01 15:06:22 -04:00
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[ "isPrecomputationEnabled", "classgridfire_1_1_graph_engine.html#a015f8975701f028c29835d3a9794e00f", null ],
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2025-07-24 11:10:45 -04:00
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[ "isStale", "classgridfire_1_1_graph_engine.html#af04a9f8a629d6f6c58c477af0f1ab9e5", null ],
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[ "isUsingReverseReactions", "classgridfire_1_1_graph_engine.html#ae7a210d9ab13ad5fb0c612f027acabd0", null ],
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[ "mapNetInToMolarAbundanceVector", "classgridfire_1_1_graph_engine.html#a27f3a928e1f6bbe7e847cffed6db729f", null ],
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2025-07-01 07:24:18 -04:00
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[ "populateReactionIDMap", "classgridfire_1_1_graph_engine.html#a26602e1b3c610780a47b5a6511d6d567", null ],
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[ "populateSpeciesToIndexMap", "classgridfire_1_1_graph_engine.html#a47202c43342b96480070874bffce1391", null ],
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2025-07-01 15:06:22 -04:00
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[ "precomputeNetwork", "classgridfire_1_1_graph_engine.html#a92644bc333bff69c5685be4552ca12fd", null ],
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2025-07-24 11:10:45 -04:00
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[ "primeEngine", "classgridfire_1_1_graph_engine.html#ae7a371be61ab09b3fa4a93f05bd44e5e", null ],
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[ "rebuild", "classgridfire_1_1_graph_engine.html#ad9d6c70ace5cbbf7f3aa7b31fce39490", null ],
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2025-07-01 07:24:18 -04:00
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[ "recordADTape", "classgridfire_1_1_graph_engine.html#a95563f6bc86007d9ee053a0f1e15b889", null ],
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2025-07-24 11:10:45 -04:00
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[ "reserveJacobianMatrix", "classgridfire_1_1_graph_engine.html#a8d0c0bd54a2908cff62dae7af0c149b5", null ],
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[ "setNetworkReactions", "classgridfire_1_1_graph_engine.html#a371ba0881d6903ddb2d586faa61805d0", null ],
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2025-07-01 15:06:22 -04:00
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[ "setPrecomputation", "classgridfire_1_1_graph_engine.html#a6c5410878496abc349ba30b691cdf0f1", null ],
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2025-07-01 11:40:51 -04:00
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[ "setScreeningModel", "classgridfire_1_1_graph_engine.html#a8110e687844f921438bb517e1d8ce62f", null ],
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2025-07-24 11:10:45 -04:00
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[ "setUseReverseReactions", "classgridfire_1_1_graph_engine.html#a409991d527ea4d4b05d1af907fe5d197", null ],
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2025-07-01 07:24:18 -04:00
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[ "syncInternalMaps", "classgridfire_1_1_graph_engine.html#acdce8d87e23a2cd1504bc9472e538c0f", null ],
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2025-07-24 11:10:45 -04:00
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[ "update", "classgridfire_1_1_graph_engine.html#a5ac7cff23e70bd07ba7e510b753e2ab6", null ],
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2025-07-01 07:24:18 -04:00
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[ "validateConservation", "classgridfire_1_1_graph_engine.html#acf4cfccea20f5cb31c9886bf233a28be", null ],
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2025-07-24 11:10:45 -04:00
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[ "m_atomicReverseRates", "classgridfire_1_1_graph_engine.html#a816797b1d656d416844489692af44cf6", null ],
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2025-07-01 07:24:18 -04:00
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[ "m_config", "classgridfire_1_1_graph_engine.html#a3b17102b143435ddfdc015d7a50c4b18", null ],
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2025-07-01 15:06:22 -04:00
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[ "m_constants", "classgridfire_1_1_graph_engine.html#a10c01bc20ae668c2857efb2a1783098e", null ],
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2025-07-24 11:10:45 -04:00
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[ "m_depth", "classgridfire_1_1_graph_engine.html#a80c73690d5af247ff9f2ba8b00abce01", null ],
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[ "m_full_jacobian_sparsity_pattern", "classgridfire_1_1_graph_engine.html#a19b2eea0e8d05ac90f9fd7120bdc6e06", null ],
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[ "m_jac_work", "classgridfire_1_1_graph_engine.html#a250cc6350dc052fbdfdf9a02066e7891", null ],
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2025-07-01 07:24:18 -04:00
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[ "m_jacobianMatrix", "classgridfire_1_1_graph_engine.html#a2f1718c89d4aaad028102724d18fa910", null ],
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[ "m_logger", "classgridfire_1_1_graph_engine.html#a483979fc154adc88d029b3b672066d53", null ],
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[ "m_networkSpecies", "classgridfire_1_1_graph_engine.html#a92d26068ba139e47d335f5fe9e2814cc", null ],
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2025-07-24 11:10:45 -04:00
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2025-07-01 15:06:22 -04:00
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2025-07-01 07:24:18 -04:00
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[ "m_reactions", "classgridfire_1_1_graph_engine.html#acb7c4f5108b0efeae48ad15598e808c3", null ],
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2025-07-01 11:40:51 -04:00
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2025-07-01 07:24:18 -04:00
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2025-07-01 15:06:22 -04:00
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2025-07-24 11:10:45 -04:00
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[ "m_useReverseReactions", "classgridfire_1_1_graph_engine.html#a32d3efbf4c3d5158f87c0c732cdc26dc", null ]
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2025-07-01 07:24:18 -04:00
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