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docs(docs): added doxygen html directory
2025-07-01 07:24:18 -04:00
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<div id="projectname">GridFire<span id="projectnumber">&#160;0.0.1a</span>
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<div id="projectbrief">General Purpose Nuclear Network</div>
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<div class="textblock">This inheritance list is sorted roughly, but not completely, alphabetically:</div><div class="directory">
docs(docs): asdded and cleaned up docs
2025-07-24 11:10:45 -04:00
<div class="levels">[detail level <span onclick="javascript:dynsection.toggleLevel(1);">1</span><span onclick="javascript:dynsection.toggleLevel(2);">2</span><span onclick="javascript:dynsection.toggleLevel(3);">3</span><span onclick="javascript:dynsection.toggleLevel(4);">4</span>]</div><table class="directory">
docs(docs): added doxygen html directory
2025-07-01 07:24:18 -04:00
<tr id="row_0_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1approx8_1_1_approx8_net.html" target="_self">gridfire::approx8::Approx8Net</a></td><td class="desc">Contains constants and arrays related to the nuclear network </td></tr>
docs(docs): asdded and cleaned up docs
2025-07-24 11:10:45 -04:00
<tr id="row_1_" class="odd"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_1_" class="arrow" onclick="dynsection.toggleFolder('1_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><b>CppAD::atomic_base</b></td><td class="desc"></td></tr>
<tr id="row_1_0_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_graph_engine_1_1_atomic_reverse_rate.html" target="_self">gridfire::GraphEngine::AtomicReverseRate</a></td><td class="desc"></td></tr>
<tr id="row_2_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_multiscale_partitioning_engine_view_1_1_cache_stats.html" target="_self">gridfire::MultiscalePartitioningEngineView::CacheStats</a></td><td class="desc">Struct for tracking cache statistics </td></tr>
<tr id="row_3_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_graph_engine_1_1constants.html" target="_self">gridfire::GraphEngine::constants</a></td><td class="desc"></td></tr>
<tr id="row_4_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_multiscale_partitioning_engine_view_1_1_eigen_functor.html" target="_self">gridfire::MultiscalePartitioningEngineView::EigenFunctor</a></td><td class="desc">Functor for solving QSE abundances using Eigen's nonlinear optimization </td></tr>
<tr id="row_5_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_5_" class="arrow" onclick="dynsection.toggleFolder('5_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine.html" target="_self">gridfire::Engine</a></td><td class="desc">Abstract base class for a reaction network engine </td></tr>
<tr id="row_5_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="class_py_engine.html" target="_self">PyEngine</a></td><td class="desc"></td></tr>
<tr id="row_5_1_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_5_1_" class="arrow" onclick="dynsection.toggleFolder('5_1_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_dynamic_engine.html" target="_self">gridfire::DynamicEngine</a></td><td class="desc">Abstract class for engines supporting Jacobian and stoichiometry operations </td></tr>
<tr id="row_5_1_0_" class="odd"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="class_py_dynamic_engine.html" target="_self">PyDynamicEngine</a></td><td class="desc"></td></tr>
<tr id="row_5_1_1_" class="even"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_adaptive_engine_view.html" target="_self">gridfire::AdaptiveEngineView</a></td><td class="desc">An engine view that dynamically adapts the reaction network based on runtime conditions </td></tr>
<tr id="row_5_1_2_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span id="arr_5_1_2_" class="arrow" onclick="dynsection.toggleFolder('5_1_2_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_defined_engine_view.html" target="_self">gridfire::DefinedEngineView</a></td><td class="desc"></td></tr>
<tr id="row_5_1_2_0_" class="even"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_file_defined_engine_view.html" target="_self">gridfire::FileDefinedEngineView</a></td><td class="desc"></td></tr>
<tr id="row_5_1_2_1_" class="odd"><td class="entry"><span style="width:64px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_network_priming_engine_view.html" target="_self">gridfire::NetworkPrimingEngineView</a></td><td class="desc">Provides a view of a <a class="el" href="classgridfire_1_1_dynamic_engine.html" title="Abstract class for engines supporting Jacobian and stoichiometry operations.">DynamicEngine</a> filtered to reactions involving a specified priming species </td></tr>
<tr id="row_5_1_3_" class="even"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_graph_engine.html" target="_self">gridfire::GraphEngine</a></td><td class="desc">A reaction network engine that uses a graph-based representation </td></tr>
<tr id="row_5_1_4_" class="odd"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_multiscale_partitioning_engine_view.html" target="_self">gridfire::MultiscalePartitioningEngineView</a></td><td class="desc">An engine view that partitions the reaction network into multiple groups based on timescales </td></tr>
<tr id="row_6_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_6_" class="arrow" onclick="dynsection.toggleFolder('6_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1expectations_1_1_engine_error.html" target="_self">gridfire::expectations::EngineError</a></td><td class="desc"></td></tr>
<tr id="row_6_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1expectations_1_1_engine_index_error.html" target="_self">gridfire::expectations::EngineIndexError</a></td><td class="desc"></td></tr>
<tr id="row_6_1_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1expectations_1_1_stale_engine_error.html" target="_self">gridfire::expectations::StaleEngineError</a></td><td class="desc"></td></tr>
<tr id="row_7_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine_view.html" target="_self">gridfire::EngineView&lt; EngineT &gt;</a></td><td class="desc">Abstract base class for a "view" of a reaction network engine </td></tr>
<tr id="row_8_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_8_" class="arrow" onclick="dynsection.toggleFolder('8_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine_view.html" target="_self">gridfire::EngineView&lt; DynamicEngine &gt;</a></td><td class="desc"></td></tr>
<tr id="row_8_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_adaptive_engine_view.html" target="_self">gridfire::AdaptiveEngineView</a></td><td class="desc">An engine view that dynamically adapts the reaction network based on runtime conditions </td></tr>
<tr id="row_8_1_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_defined_engine_view.html" target="_self">gridfire::DefinedEngineView</a></td><td class="desc"></td></tr>
<tr id="row_8_2_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_multiscale_partitioning_engine_view.html" target="_self">gridfire::MultiscalePartitioningEngineView</a></td><td class="desc">An engine view that partitions the reaction network into multiple groups based on timescales </td></tr>
<tr id="row_9_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_9_" class="arrow" onclick="dynsection.toggleFolder('9_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine_view.html" target="_self">gridfire::EngineView&lt; gridfire::DynamicEngine &gt;</a></td><td class="desc"></td></tr>
<tr id="row_9_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="class_py_dynamic_engine_view.html" target="_self">PyDynamicEngineView</a></td><td class="desc"></td></tr>
<tr id="row_10_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_10_" class="arrow" onclick="dynsection.toggleFolder('10_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_engine_view.html" target="_self">gridfire::EngineView&lt; gridfire::Engine &gt;</a></td><td class="desc"></td></tr>
<tr id="row_10_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="class_py_engine_view.html" target="_self">PyEngineView</a></td><td class="desc"></td></tr>
<tr id="row_11_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_11_" class="arrow" onclick="dynsection.toggleFolder('11_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><b>std::exception</b></td><td class="desc">STL class </td></tr>
<tr id="row_11_0_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span id="arr_11_0_" class="arrow" onclick="dynsection.toggleFolder('11_0_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_engine_error.html" target="_self">gridfire::exceptions::EngineError</a></td><td class="desc"></td></tr>
<tr id="row_11_0_0_" class="even"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_failed_to_partition_engine_error.html" target="_self">gridfire::exceptions::FailedToPartitionEngineError</a></td><td class="desc"></td></tr>
<tr id="row_11_0_1_" class="odd"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_network_resized_error.html" target="_self">gridfire::exceptions::NetworkResizedError</a></td><td class="desc"></td></tr>
<tr id="row_11_0_2_" class="even"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_stale_engine_error.html" target="_self">gridfire::exceptions::StaleEngineError</a></td><td class="desc"></td></tr>
<tr id="row_11_0_3_" class="odd"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_stale_engine_trigger.html" target="_self">gridfire::exceptions::StaleEngineTrigger</a></td><td class="desc"></td></tr>
<tr id="row_11_0_4_" class="even"><td class="entry"><span style="width:48px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1exceptions_1_1_unable_to_set_network_reactions_error.html" target="_self">gridfire::exceptions::UnableToSetNetworkReactionsError</a></td><td class="desc"></td></tr>
<tr id="row_12_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1_q_s_e_cache_key_01_4.html" target="_self">std::hash&lt; gridfire::QSECacheKey &gt;</a></td><td class="desc"></td></tr>
<tr id="row_13_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_logical_reaction_set_01_4.html" target="_self">std::hash&lt; gridfire::reaction::LogicalReactionSet &gt;</a></td><td class="desc"></td></tr>
<tr id="row_14_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_01_4.html" target="_self">std::hash&lt; gridfire::reaction::Reaction &gt;</a></td><td class="desc"></td></tr>
<tr id="row_15_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structstd_1_1hash_3_01gridfire_1_1reaction_1_1_reaction_set_01_4.html" target="_self">std::hash&lt; gridfire::reaction::ReactionSet &gt;</a></td><td class="desc"></td></tr>
<tr id="row_16_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1partition_1_1_rauscher_thielemann_partition_function_1_1_identified_isotope.html" target="_self">gridfire::partition::RauscherThielemannPartitionFunction::IdentifiedIsotope</a></td><td class="desc"></td></tr>
<tr id="row_17_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1partition_1_1_rauscher_thielemann_partition_function_1_1_interpolation_points.html" target="_self">gridfire::partition::RauscherThielemannPartitionFunction::InterpolationPoints</a></td><td class="desc"></td></tr>
<tr id="row_18_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1partition_1_1_rauscher_thielemann_partition_function_1_1_isotope_data.html" target="_self">gridfire::partition::RauscherThielemannPartitionFunction::IsotopeData</a></td><td class="desc"></td></tr>
<tr id="row_19_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1approx8_1_1_jacobian.html" target="_self">gridfire::approx8::Jacobian</a></td><td class="desc">Functor to calculate the <a class="el" href="structgridfire_1_1approx8_1_1_jacobian.html" title="Functor to calculate the Jacobian matrix for implicit solvers.">Jacobian</a> matrix for implicit solvers </td></tr>
<tr id="row_20_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1solver_1_1_direct_network_solver_1_1_jacobian_functor.html" target="_self">gridfire::solver::DirectNetworkSolver::JacobianFunctor</a></td><td class="desc">Functor for calculating the Jacobian matrix </td></tr>
<tr id="row_21_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_net_in.html" target="_self">gridfire::NetIn</a></td><td class="desc"></td></tr>
<tr id="row_22_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_net_out.html" target="_self">gridfire::NetOut</a></td><td class="desc"></td></tr>
<tr id="row_23_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_23_" class="arrow" onclick="dynsection.toggleFolder('23_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1_network.html" target="_self">gridfire::Network</a></td><td class="desc"></td></tr>
<tr id="row_23_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1approx8_1_1_approx8_network.html" target="_self">gridfire::approx8::Approx8Network</a></td><td class="desc">Class for the Approx8 nuclear reaction network </td></tr>
<tr id="row_24_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_24_" class="arrow" onclick="dynsection.toggleFolder('24_')">&#9660;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_network_file_parser.html" target="_self">gridfire::io::NetworkFileParser</a></td><td class="desc">An abstract base class for network file parsers </td></tr>
<tr id="row_24_0_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="class_py_network_file_parser.html" target="_self">PyNetworkFileParser</a></td><td class="desc"></td></tr>
<tr id="row_24_1_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1io_1_1_m_e_s_a_network_file_parser.html" target="_self">gridfire::io::MESANetworkFileParser</a></td><td class="desc">A parser for MESA-format network files </td></tr>
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<tr id="row_28_1_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1partition_1_1_composite_partition_function.html" target="_self">gridfire::partition::CompositePartitionFunction</a></td><td class="desc">Combines multiple <a class="el" href="classgridfire_1_1partition_1_1_partition_function.html" title="Abstract interface for evaluating nuclear partition functions.">PartitionFunction</a> instances into a single composite strategy </td></tr>
<tr id="row_28_2_" class="even"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1partition_1_1_ground_state_partition_function.html" target="_self">gridfire::partition::GroundStatePartitionFunction</a></td><td class="desc">Partition function implementation for nuclear ground states </td></tr>
<tr id="row_28_3_" class="odd"><td class="entry"><span style="width:32px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="classgridfire_1_1partition_1_1_rauscher_thielemann_partition_function.html" target="_self">gridfire::partition::RauscherThielemannPartitionFunction</a></td><td class="desc">Partition function using Rauscher-Thielemann tabulated normalized G-values </td></tr>
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<tr id="row_38_" class="odd"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><span class="icona"><span class="icon">C</span></span><a class="el" href="structgridfire_1_1_adaptive_engine_view_1_1_reaction_flow.html" target="_self">gridfire::AdaptiveEngineView::ReactionFlow</a></td><td class="desc">A struct to hold a reaction and its flow rate </td></tr>
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docs(docs): added doxygen html directory
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