79 lines
2.4 KiB
C
79 lines
2.4 KiB
C
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#pragma once
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#include "gridfire/engine/engine_abstract.h"
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#include "gridfire/engine/engine_view_abstract.h"
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#include "fourdst/composition/atomicSpecies.h"
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#include "fourdst/logging/logging.h"
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#include "quill/Logger.h"
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namespace gridfire {
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class AdaptiveEngineView final : public DynamicEngine, public EngineView<DynamicEngine> {
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public:
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explicit AdaptiveEngineView(DynamicEngine& baseEngine);
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void update(const NetIn& netIn);
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const std::vector<fourdst::atomic::Species>& getNetworkSpecies() const override;
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StepDerivatives<double> calculateRHSAndEnergy(
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const std::vector<double> &Y,
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const double T9,
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const double rho
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) const override;
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void generateJacobianMatrix(
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const std::vector<double> &Y,
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const double T9,
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const double rho
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) override;
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double getJacobianMatrixEntry(
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const int i,
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const int j
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) const override;
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void generateStoichiometryMatrix() override;
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int getStoichiometryMatrixEntry(
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const int speciesIndex,
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const int reactionIndex
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) const override;
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double calculateMolarReactionFlow(
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const reaction::Reaction &reaction,
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const std::vector<double> &Y,
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double T9,
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double rho
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) const override;
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const reaction::REACLIBLogicalReactionSet& getNetworkReactions() const override;
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std::unordered_map<fourdst::atomic::Species, double> getSpeciesTimescales(
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const std::vector<double> &Y,
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double T9,
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double rho
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) const override;
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const DynamicEngine& getBaseEngine() const override { return m_baseEngine; }
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private:
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using Config = fourdst::config::Config;
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using LogManager = fourdst::logging::LogManager;
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DynamicEngine& m_baseEngine;
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std::vector<fourdst::atomic::Species> m_activeSpecies;
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reaction::REACLIBLogicalReactionSet m_activeReactions;
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std::vector<size_t> m_speciesIndexMap;
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bool m_isStale = true;
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Config& m_config = Config::getInstance();
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quill::Logger* m_logger = LogManager::getInstance().getLogger("log");
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private:
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std::vector<size_t> constructSpeciesIndexMap() const;
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private:
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struct ReactionFlow {
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const reaction::Reaction* reactionPtr;
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double flowRate;
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};
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};
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}
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