2025-07-01 07:24:18 -04:00
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
< html xmlns = "http://www.w3.org/1999/xhtml" lang = "en-US" >
< head >
< meta http-equiv = "Content-Type" content = "text/xhtml;charset=UTF-8" / >
< meta http-equiv = "X-UA-Compatible" content = "IE=11" / >
< meta name = "generator" content = "Doxygen 1.13.2" / >
< meta name = "viewport" content = "width=device-width, initial-scale=1" / >
< title > GridFire: src/network/lib/network.cpp Source File< / title >
< link href = "tabs.css" rel = "stylesheet" type = "text/css" / >
< script type = "text/javascript" src = "jquery.js" > < / script >
< script type = "text/javascript" src = "dynsections.js" > < / script >
< script type = "text/javascript" src = "clipboard.js" > < / script >
< link href = "navtree.css" rel = "stylesheet" type = "text/css" / >
< script type = "text/javascript" src = "navtreedata.js" > < / script >
< script type = "text/javascript" src = "navtree.js" > < / script >
< script type = "text/javascript" src = "resize.js" > < / script >
< script type = "text/javascript" src = "cookie.js" > < / script >
< link href = "search/search.css" rel = "stylesheet" type = "text/css" / >
< script type = "text/javascript" src = "search/searchdata.js" > < / script >
< script type = "text/javascript" src = "search/search.js" > < / script >
< link href = "doxygen.css" rel = "stylesheet" type = "text/css" / >
< link href = "doxygen-awesome.css" rel = "stylesheet" type = "text/css" / >
< link href = "doxygen-awesome-sidebar-only.css" rel = "stylesheet" type = "text/css" / >
< / head >
< body >
< div id = "top" > <!-- do not remove this div, it is closed by doxygen! -->
< div id = "titlearea" >
< table cellspacing = "0" cellpadding = "0" >
< tbody >
< tr id = "projectrow" >
< td id = "projectalign" >
< div id = "projectname" > GridFire< span id = "projectnumber" >   0.0.1a< / span >
< / div >
< div id = "projectbrief" > General Purpose Nuclear Network< / div >
< / td >
< / tr >
< / tbody >
< / table >
< / div >
<!-- end header part -->
<!-- Generated by Doxygen 1.13.2 -->
< script type = "text/javascript" >
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699& dn=expat.txt MIT */
var searchBox = new SearchBox("searchBox", "search/",'.html');
/* @license-end */
< / script >
< script type = "text/javascript" >
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699& dn=expat.txt MIT */
$(function() { codefold.init(0); });
/* @license-end */
< / script >
< script type = "text/javascript" src = "menudata.js" > < / script >
< script type = "text/javascript" src = "menu.js" > < / script >
< script type = "text/javascript" >
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699& dn=expat.txt MIT */
$(function() {
initMenu('',true,false,'search.php','Search',true);
$(function() { init_search(); });
});
/* @license-end */
< / script >
< div id = "main-nav" > < / div >
< / div > <!-- top -->
< div id = "side-nav" class = "ui-resizable side-nav-resizable" >
< div id = "nav-tree" >
< div id = "nav-tree-contents" >
< div id = "nav-sync" class = "sync" > < / div >
< / div >
< / div >
< div id = "splitbar" style = "-moz-user-select:none;"
class="ui-resizable-handle">
< / div >
< / div >
< script type = "text/javascript" >
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699& dn=expat.txt MIT */
$(function(){initNavTree('network_8cpp_source.html',''); initResizable(true); });
/* @license-end */
< / script >
< div id = "doc-content" >
<!-- window showing the filter options -->
< div id = "MSearchSelectWindow"
onmouseover="return searchBox.OnSearchSelectShow()"
onmouseout="return searchBox.OnSearchSelectHide()"
onkeydown="return searchBox.OnSearchSelectKey(event)">
< / div >
<!-- iframe showing the search results (closed by default) -->
< div id = "MSearchResultsWindow" >
< div id = "MSearchResults" >
< div class = "SRPage" >
< div id = "SRIndex" >
< div id = "SRResults" > < / div >
< div class = "SRStatus" id = "Loading" > Loading...< / div >
< div class = "SRStatus" id = "Searching" > Searching...< / div >
< div class = "SRStatus" id = "NoMatches" > No Matches< / div >
< / div >
< / div >
< / div >
< / div >
< div class = "header" >
< div class = "headertitle" > < div class = "title" > network.cpp< / div > < / div >
< / div > <!-- header -->
< div class = "contents" >
< a href = "network_8cpp.html" > Go to the documentation of this file.< / a > < div class = "fragment" > < div class = "line" > < a id = "l00001" name = "l00001" > < / a > < span class = "lineno" > 1< / span > < span class = "comment" > /* ***********************************************************************< / span > < / div >
< div class = "line" > < a id = "l00002" name = "l00002" > < / a > < span class = "lineno" > 2< / span > < span class = "comment" > //< / span > < / div >
< div class = "line" > < a id = "l00003" name = "l00003" > < / a > < span class = "lineno" > 3< / span > < span class = "comment" > // Copyright (C) 2025 -- The 4D-STAR Collaboration< / span > < / div >
< div class = "line" > < a id = "l00004" name = "l00004" > < / a > < span class = "lineno" > 4< / span > < span class = "comment" > // File Authors: Aaron Dotter, Emily Boudreaux< / span > < / div >
< div class = "line" > < a id = "l00005" name = "l00005" > < / a > < span class = "lineno" > 5< / span > < span class = "comment" > // Last Modified: March 21, 2025< / span > < / div >
< div class = "line" > < a id = "l00006" name = "l00006" > < / a > < span class = "lineno" > 6< / span > < span class = "comment" > //< / span > < / div >
< div class = "line" > < a id = "l00007" name = "l00007" > < / a > < span class = "lineno" > 7< / span > < span class = "comment" > // 4DSSE is free software; you can use it and/or modify< / span > < / div >
< div class = "line" > < a id = "l00008" name = "l00008" > < / a > < span class = "lineno" > 8< / span > < span class = "comment" > // it under the terms and restrictions the GNU General Library Public< / span > < / div >
< div class = "line" > < a id = "l00009" name = "l00009" > < / a > < span class = "lineno" > 9< / span > < span class = "comment" > // License version 3 (GPLv3) as published by the Free Software Foundation.< / span > < / div >
< div class = "line" > < a id = "l00010" name = "l00010" > < / a > < span class = "lineno" > 10< / span > < span class = "comment" > //< / span > < / div >
< div class = "line" > < a id = "l00011" name = "l00011" > < / a > < span class = "lineno" > 11< / span > < span class = "comment" > // 4DSSE is distributed in the hope that it will be useful,< / span > < / div >
< div class = "line" > < a id = "l00012" name = "l00012" > < / a > < span class = "lineno" > 12< / span > < span class = "comment" > // but WITHOUT ANY WARRANTY; without even the implied warranty of< / span > < / div >
< div class = "line" > < a id = "l00013" name = "l00013" > < / a > < span class = "lineno" > 13< / span > < span class = "comment" > // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.< / span > < / div >
< div class = "line" > < a id = "l00014" name = "l00014" > < / a > < span class = "lineno" > 14< / span > < span class = "comment" > // See the GNU Library General Public License for more details.< / span > < / div >
< div class = "line" > < a id = "l00015" name = "l00015" > < / a > < span class = "lineno" > 15< / span > < span class = "comment" > //< / span > < / div >
< div class = "line" > < a id = "l00016" name = "l00016" > < / a > < span class = "lineno" > 16< / span > < span class = "comment" > // You should have received a copy of the GNU Library General Public License< / span > < / div >
< div class = "line" > < a id = "l00017" name = "l00017" > < / a > < span class = "lineno" > 17< / span > < span class = "comment" > // along with this software; if not, write to the Free Software< / span > < / div >
< div class = "line" > < a id = "l00018" name = "l00018" > < / a > < span class = "lineno" > 18< / span > < span class = "comment" > // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA< / span > < / div >
< div class = "line" > < a id = "l00019" name = "l00019" > < / a > < span class = "lineno" > 19< / span > < span class = "comment" > //< / span > < / div >
< div class = "line" > < a id = "l00020" name = "l00020" > < / a > < span class = "lineno" > 20< / span > < span class = "comment" > // *********************************************************************** */< / span > < / div >
< div class = "line" > < a id = "l00021" name = "l00021" > < / a > < span class = "lineno" > 21< / span > < span class = "preprocessor" > #include " < a class = "code" href = "network_8h.html" > gridfire/network.h< / a > " < / span > < / div >
< div class = "line" > < a id = "l00022" name = "l00022" > < / a > < span class = "lineno" > 22< / span > < span class = "preprocessor" > #include " < a class = "code" href = "reaclib_8h.html" > gridfire/reaction/reaclib.h< / a > " < / span > < / div >
< div class = "line" > < a id = "l00023" name = "l00023" > < / a > < span class = "lineno" > 23< / span > < span class = "preprocessor" > #include " < a class = "code" href = "reaction_8h.html" > gridfire/reaction/reaction.h< / a > " < / span > < / div >
< div class = "line" > < a id = "l00024" name = "l00024" > < / a > < span class = "lineno" > 24< / span > < / div >
< div class = "line" > < a id = "l00025" name = "l00025" > < / a > < span class = "lineno" > 25< / span > < span class = "preprocessor" > #include < ranges> < / span > < / div >
< div class = "line" > < a id = "l00026" name = "l00026" > < / a > < span class = "lineno" > 26< / span > < / div >
< div class = "line" > < a id = "l00027" name = "l00027" > < / a > < span class = "lineno" > 27< / span > < span class = "preprocessor" > #include " quill/LogMacros.h" < / span > < / div >
< div class = "line" > < a id = "l00028" name = "l00028" > < / a > < span class = "lineno" > 28< / span > < / div >
< div class = "line" > < a id = "l00029" name = "l00029" > < / a > < span class = "lineno" > 29< / span > < span class = "keyword" > namespace < / span > < a class = "code hl_namespace" href = "namespacegridfire.html" > gridfire< / a > {< / div >
< div class = "foldopen" id = "foldopen00030" data-start = "{" data-end = "}" >
< div class = "line" > < a id = "l00030" name = "l00030" > < / a > < span class = "lineno" > < a class = "line" href = "structgridfire_1_1_net_in.html#a47781e8d5503e3b4f12d669e2cbcfb65" > 30< / a > < / span > std::vector< double> < a class = "code hl_function" href = "structgridfire_1_1_net_in.html#a47781e8d5503e3b4f12d669e2cbcfb65" > NetIn::MolarAbundance< / a > ()< span class = "keyword" > const < / span > {< / div >
< div class = "line" > < a id = "l00031" name = "l00031" > < / a > < span class = "lineno" > 31< / span > std::vector < double> y;< / div >
< div class = "line" > < a id = "l00032" name = "l00032" > < / a > < span class = "lineno" > 32< / span > y.reserve(< a class = "code hl_variable" href = "structgridfire_1_1_net_in.html#a13058f4929e72c1187abbebcddb8aed1" > composition< / a > .getRegisteredSymbols().size());< / div >
< div class = "line" > < a id = "l00033" name = "l00033" > < / a > < span class = "lineno" > 33< / span > < span class = "keyword" > const< / span > < span class = "keyword" > auto< / span > [fst, snd] = < a class = "code hl_variable" href = "structgridfire_1_1_net_in.html#a13058f4929e72c1187abbebcddb8aed1" > composition< / a > .getComposition();< / div >
< div class = "line" > < a id = "l00034" name = "l00034" > < / a > < span class = "lineno" > 34< / span > < span class = "keywordflow" > for< / span > (< span class = "keyword" > const< / span > < span class = "keyword" > auto< / span > & name: fst | std::views::keys) {< / div >
< div class = "line" > < a id = "l00035" name = "l00035" > < / a > < span class = "lineno" > 35< / span > y.push_back(< a class = "code hl_variable" href = "structgridfire_1_1_net_in.html#a13058f4929e72c1187abbebcddb8aed1" > composition< / a > .getMolarAbundance(name));< / div >
< div class = "line" > < a id = "l00036" name = "l00036" > < / a > < span class = "lineno" > 36< / span > }< / div >
< div class = "line" > < a id = "l00037" name = "l00037" > < / a > < span class = "lineno" > 37< / span > < span class = "keywordflow" > return< / span > y;< / div >
< div class = "line" > < a id = "l00038" name = "l00038" > < / a > < span class = "lineno" > 38< / span > }< / div >
< / div >
< div class = "line" > < a id = "l00039" name = "l00039" > < / a > < span class = "lineno" > 39< / span > < / div >
< div class = "line" > < a id = "l00040" name = "l00040" > < / a > < span class = "lineno" > 40< / span > < / div >
< div class = "foldopen" id = "foldopen00041" data-start = "{" data-end = "}" >
< div class = "line" > < a id = "l00041" name = "l00041" > < / a > < span class = "lineno" > < a class = "line" href = "classgridfire_1_1_network.html#a20b631f2404bfdec2333f680a62abf55" > 41< / a > < / span > < a class = "code hl_function" href = "classgridfire_1_1_network.html#a20b631f2404bfdec2333f680a62abf55" > Network::Network< / a > (< span class = "keyword" > const< / span > < a class = "code hl_enumeration" href = "namespacegridfire.html#a3f3d6b3f9742b70e62049ccefbb60f37" > NetworkFormat< / a > format) :< / div >
< div class = "line" > < a id = "l00042" name = "l00042" > < / a > < span class = "lineno" > 42< / span > < a class = "code hl_variable" href = "classgridfire_1_1_network.html#a9f8802012728ef5fea0e8cd465044e09" > m_config< / a > (fourdst::config::Config::getInstance()),< / div >
< div class = "line" > < a id = "l00043" name = "l00043" > < / a > < span class = "lineno" > 43< / span > < a class = "code hl_variable" href = "classgridfire_1_1_network.html#a0bb7c7be9a3c3212ef6dcbf26dcacb16" > m_logManager< / a > (fourdst::logging::LogManager::getInstance()),< / div >
< div class = "line" > < a id = "l00044" name = "l00044" > < / a > < span class = "lineno" > 44< / span > < a class = "code hl_variable" href = "classgridfire_1_1_network.html#a960d309defc570f92d296ce4b93920e5" > m_logger< / a > (< a class = "code hl_variable" href = "classgridfire_1_1_network.html#a0bb7c7be9a3c3212ef6dcbf26dcacb16" > m_logManager< / a > .getLogger(< span class = "stringliteral" > " log" < / span > )),< / div >
< div class = "line" > < a id = "l00045" name = "l00045" > < / a > < span class = "lineno" > 45< / span > < a class = "code hl_variable" href = "classgridfire_1_1_network.html#a37218e18f1bdbda7be94aa230f47dd18" > m_format< / a > (format),< / div >
< div class = "line" > < a id = "l00046" name = "l00046" > < / a > < span class = "lineno" > 46< / span > < a class = "code hl_variable" href = "classgridfire_1_1_network.html#adf7002883160101c9f9d1b376b265410" > m_constants< / a > (fourdst::constant::Constants::getInstance()){< / div >
< div class = "line" > < a id = "l00047" name = "l00047" > < / a > < span class = "lineno" > 47< / span > < span class = "keywordflow" > if< / span > (format == < a class = "code hl_enumvalue" href = "namespacegridfire.html#a3f3d6b3f9742b70e62049ccefbb60f37aac700abde5f6ff8b7328193eb19697b2" > NetworkFormat::UNKNOWN< / a > ) {< / div >
< div class = "line" > < a id = "l00048" name = "l00048" > < / a > < span class = "lineno" > 48< / span > LOG_ERROR(< a class = "code hl_variable" href = "classgridfire_1_1_network.html#a960d309defc570f92d296ce4b93920e5" > m_logger< / a > , < span class = "stringliteral" > " nuclearNetwork::Network::Network() called with UNKNOWN format" < / span > );< / div >
< div class = "line" > < a id = "l00049" name = "l00049" > < / a > < span class = "lineno" > 49< / span > < a class = "code hl_variable" href = "classgridfire_1_1_network.html#a960d309defc570f92d296ce4b93920e5" > m_logger< / a > -> flush_log();< / div >
< div class = "line" > < a id = "l00050" name = "l00050" > < / a > < span class = "lineno" > 50< / span > < span class = "keywordflow" > throw< / span > std::runtime_error(< span class = "stringliteral" > " nuclearNetwork::Network::Network() called with UNKNOWN format" < / span > );< / div >
< div class = "line" > < a id = "l00051" name = "l00051" > < / a > < span class = "lineno" > 51< / span > }< / div >
< div class = "line" > < a id = "l00052" name = "l00052" > < / a > < span class = "lineno" > 52< / span > }< / div >
< / div >
< div class = "line" > < a id = "l00053" name = "l00053" > < / a > < span class = "lineno" > 53< / span > < / div >
< div class = "foldopen" id = "foldopen00054" data-start = "{" data-end = "}" >
< div class = "line" > < a id = "l00054" name = "l00054" > < / a > < span class = "lineno" > < a class = "line" href = "classgridfire_1_1_network.html#a315a123499719178286b29e2aca69118" > 54< / a > < / span > < a class = "code hl_enumeration" href = "namespacegridfire.html#a3f3d6b3f9742b70e62049ccefbb60f37" > NetworkFormat< / a > < a class = "code hl_function" href = "classgridfire_1_1_network.html#a315a123499719178286b29e2aca69118" > Network::getFormat< / a > ()< span class = "keyword" > const < / span > {< / div >
< div class = "line" > < a id = "l00055" name = "l00055" > < / a > < span class = "lineno" > 55< / span > < span class = "keywordflow" > return< / span > < a class = "code hl_variable" href = "classgridfire_1_1_network.html#a37218e18f1bdbda7be94aa230f47dd18" > m_format< / a > ;< / div >
< div class = "line" > < a id = "l00056" name = "l00056" > < / a > < span class = "lineno" > 56< / span > }< / div >
< / div >
< div class = "line" > < a id = "l00057" name = "l00057" > < / a > < span class = "lineno" > 57< / span > < / div >
< div class = "foldopen" id = "foldopen00058" data-start = "{" data-end = "}" >
< div class = "line" > < a id = "l00058" name = "l00058" > < / a > < span class = "lineno" > < a class = "line" href = "classgridfire_1_1_network.html#a787c601f6e4bd06600bf946efbcc98d4" > 58< / a > < / span > < a class = "code hl_enumeration" href = "namespacegridfire.html#a3f3d6b3f9742b70e62049ccefbb60f37" > NetworkFormat< / a > < a class = "code hl_function" href = "classgridfire_1_1_network.html#a787c601f6e4bd06600bf946efbcc98d4" > Network::setFormat< / a > (< span class = "keyword" > const< / span > < a class = "code hl_enumeration" href = "namespacegridfire.html#a3f3d6b3f9742b70e62049ccefbb60f37" > NetworkFormat< / a > format) {< / div >
< div class = "line" > < a id = "l00059" name = "l00059" > < / a > < span class = "lineno" > 59< / span > < span class = "keyword" > const< / span > < a class = "code hl_enumeration" href = "namespacegridfire.html#a3f3d6b3f9742b70e62049ccefbb60f37" > NetworkFormat< / a > oldFormat = < a class = "code hl_variable" href = "classgridfire_1_1_network.html#a37218e18f1bdbda7be94aa230f47dd18" > m_format< / a > ;< / div >
< div class = "line" > < a id = "l00060" name = "l00060" > < / a > < span class = "lineno" > 60< / span > < a class = "code hl_variable" href = "classgridfire_1_1_network.html#a37218e18f1bdbda7be94aa230f47dd18" > m_format< / a > = format;< / div >
< div class = "line" > < a id = "l00061" name = "l00061" > < / a > < span class = "lineno" > 61< / span > < span class = "keywordflow" > return< / span > oldFormat;< / div >
< div class = "line" > < a id = "l00062" name = "l00062" > < / a > < span class = "lineno" > 62< / span > }< / div >
< / div >
< div class = "line" > < a id = "l00063" name = "l00063" > < / a > < span class = "lineno" > 63< / span > < / div >
< div class = "foldopen" id = "foldopen00064" data-start = "{" data-end = "}" >
2025-07-01 11:40:51 -04:00
< div class = "line" > < a id = "l00064" name = "l00064" > < / a > < span class = "lineno" > < a class = "line" href = "namespacegridfire.html#aa77f83539d9ae90e3bf541309bd9c83a" > 64< / a > < / span > < a class = "code hl_typedef" href = "namespacegridfire_1_1reaction.html#aa86f08712565f278adacc7cd2361eb31" > reaction::LogicalReactionSet< / a > < a class = "code hl_function" href = "namespacegridfire.html#aa77f83539d9ae90e3bf541309bd9c83a" > build_reaclib_nuclear_network< / a > (< span class = "keyword" > const< / span > fourdst::composition::Composition & composition, < span class = "keywordtype" > bool< / span > reverse) {< / div >
2025-07-01 07:24:18 -04:00
< div class = "line" > < a id = "l00065" name = "l00065" > < / a > < span class = "lineno" > 65< / span > < span class = "keyword" > using namespace < / span > < a class = "code hl_namespace" href = "namespacegridfire_1_1reaction.html" > reaction< / a > ;< / div >
< div class = "line" > < a id = "l00066" name = "l00066" > < / a > < span class = "lineno" > 66< / span > std::vector< Reaction> reaclibReactions;< / div >
< div class = "line" > < a id = "l00067" name = "l00067" > < / a > < span class = "lineno" > 67< / span > < span class = "keyword" > auto< / span > logger = fourdst::logging::LogManager::getInstance().getLogger(< span class = "stringliteral" > " log" < / span > );< / div >
< div class = "line" > < a id = "l00068" name = "l00068" > < / a > < span class = "lineno" > 68< / span > < / div >
< div class = "line" > < a id = "l00069" name = "l00069" > < / a > < span class = "lineno" > 69< / span > < span class = "keywordflow" > for< / span > (< span class = "keyword" > const< / span > < span class = "keyword" > auto< / span > & < a class = "code hl_namespace" href = "namespacegridfire_1_1reaction.html" > reaction< / a > : < a class = "code hl_function" href = "namespacegridfire_1_1reaclib.html#a91c7971c9d0a2971b9a6fa4d841c761d" > reaclib::get_all_reactions< / a > ()) {< / div >
< div class = "line" > < a id = "l00070" name = "l00070" > < / a > < span class = "lineno" > 70< / span > < span class = "keywordflow" > if< / span > (< a class = "code hl_namespace" href = "namespacegridfire_1_1reaction.html" > reaction< / a > .is_reverse() != reverse) {< / div >
< div class = "line" > < a id = "l00071" name = "l00071" > < / a > < span class = "lineno" > 71< / span > < span class = "keywordflow" > continue< / span > ; < span class = "comment" > // Skip reactions that do not match the requested direction< / span > < / div >
< div class = "line" > < a id = "l00072" name = "l00072" > < / a > < span class = "lineno" > 72< / span > }< / div >
< div class = "line" > < a id = "l00073" name = "l00073" > < / a > < span class = "lineno" > 73< / span > < span class = "keywordtype" > bool< / span > gotReaction = < span class = "keyword" > true< / span > ;< / div >
< div class = "line" > < a id = "l00074" name = "l00074" > < / a > < span class = "lineno" > 74< / span > < span class = "keyword" > const< / span > < span class = "keyword" > auto< / span > & reactants = < a class = "code hl_namespace" href = "namespacegridfire_1_1reaction.html" > reaction< / a > .reactants();< / div >
< div class = "line" > < a id = "l00075" name = "l00075" > < / a > < span class = "lineno" > 75< / span > < span class = "keywordflow" > for< / span > (< span class = "keyword" > const< / span > < span class = "keyword" > auto< / span > & reactant : reactants) {< / div >
< div class = "line" > < a id = "l00076" name = "l00076" > < / a > < span class = "lineno" > 76< / span > < span class = "keywordflow" > if< / span > (!composition.contains(reactant)) {< / div >
< div class = "line" > < a id = "l00077" name = "l00077" > < / a > < span class = "lineno" > 77< / span > gotReaction = < span class = "keyword" > false< / span > ;< / div >
< div class = "line" > < a id = "l00078" name = "l00078" > < / a > < span class = "lineno" > 78< / span > < span class = "keywordflow" > break< / span > ; < span class = "comment" > // If any reactant is not in the composition, skip this reaction< / span > < / div >
< div class = "line" > < a id = "l00079" name = "l00079" > < / a > < span class = "lineno" > 79< / span > }< / div >
< div class = "line" > < a id = "l00080" name = "l00080" > < / a > < span class = "lineno" > 80< / span > }< / div >
< div class = "line" > < a id = "l00081" name = "l00081" > < / a > < span class = "lineno" > 81< / span > < span class = "keywordflow" > if< / span > (gotReaction) {< / div >
< div class = "line" > < a id = "l00082" name = "l00082" > < / a > < span class = "lineno" > 82< / span > LOG_TRACE_L3(logger, < span class = "stringliteral" > " Adding reaction {} to REACLIB reaction set." < / span > , < a class = "code hl_namespace" href = "namespacegridfire_1_1reaction.html" > reaction< / a > .peName());< / div >
< div class = "line" > < a id = "l00083" name = "l00083" > < / a > < span class = "lineno" > 83< / span > reaclibReactions.push_back(< a class = "code hl_namespace" href = "namespacegridfire_1_1reaction.html" > reaction< / a > );< / div >
< div class = "line" > < a id = "l00084" name = "l00084" > < / a > < span class = "lineno" > 84< / span > }< / div >
< div class = "line" > < a id = "l00085" name = "l00085" > < / a > < span class = "lineno" > 85< / span > }< / div >
< div class = "line" > < a id = "l00086" name = "l00086" > < / a > < span class = "lineno" > 86< / span > < span class = "keyword" > const< / span > ReactionSet reactionSet(reaclibReactions);< / div >
2025-07-01 11:40:51 -04:00
< div class = "line" > < a id = "l00087" name = "l00087" > < / a > < span class = "lineno" > 87< / span > < span class = "keywordflow" > return< / span > packReactionSetToLogicalReactionSet(reactionSet);< / div >
2025-07-01 07:24:18 -04:00
< div class = "line" > < a id = "l00088" name = "l00088" > < / a > < span class = "lineno" > 88< / span > }< / div >
< / div >
< div class = "line" > < a id = "l00089" name = "l00089" > < / a > < span class = "lineno" > 89< / span > < / div >
< div class = "line" > < a id = "l00090" name = "l00090" > < / a > < span class = "lineno" > 90< / span > < span class = "comment" > // Trim whitespace from both ends of a string< / span > < / div >
< div class = "foldopen" id = "foldopen00091" data-start = "{" data-end = "}" >
< div class = "line" > < a id = "l00091" name = "l00091" > < / a > < span class = "lineno" > < a class = "line" href = "namespacegridfire.html#a8b245f261cd8d1711ae8d593b054cf98" > 91< / a > < / span > std::string < a class = "code hl_function" href = "namespacegridfire.html#a8b245f261cd8d1711ae8d593b054cf98" > trim_whitespace< / a > (< span class = "keyword" > const< / span > std::string& str) {< / div >
< div class = "line" > < a id = "l00092" name = "l00092" > < / a > < span class = "lineno" > 92< / span > < span class = "keyword" > auto< / span > startIt = str.begin();< / div >
< div class = "line" > < a id = "l00093" name = "l00093" > < / a > < span class = "lineno" > 93< / span > < span class = "keyword" > auto< / span > endIt = str.end();< / div >
< div class = "line" > < a id = "l00094" name = "l00094" > < / a > < span class = "lineno" > 94< / span > < / div >
< div class = "line" > < a id = "l00095" name = "l00095" > < / a > < span class = "lineno" > 95< / span > < span class = "keywordflow" > while< / span > (startIt != endIt & & std::isspace(< span class = "keyword" > static_cast< < / span > < span class = "keywordtype" > unsigned< / span > < span class = "keywordtype" > char< / span > < span class = "keyword" > > < / span > (*startIt))) {< / div >
< div class = "line" > < a id = "l00096" name = "l00096" > < / a > < span class = "lineno" > 96< / span > ++startIt;< / div >
< div class = "line" > < a id = "l00097" name = "l00097" > < / a > < span class = "lineno" > 97< / span > }< / div >
< div class = "line" > < a id = "l00098" name = "l00098" > < / a > < span class = "lineno" > 98< / span > < span class = "keywordflow" > if< / span > (startIt == endIt) {< / div >
< div class = "line" > < a id = "l00099" name = "l00099" > < / a > < span class = "lineno" > 99< / span > < span class = "keywordflow" > return< / span > < span class = "stringliteral" > " " < / span > ;< / div >
< div class = "line" > < a id = "l00100" name = "l00100" > < / a > < span class = "lineno" > 100< / span > }< / div >
< div class = "line" > < a id = "l00101" name = "l00101" > < / a > < span class = "lineno" > 101< / span > < span class = "keyword" > auto< / span > ritr = std::find_if(str.rbegin(), std::string::const_reverse_iterator(startIt),< / div >
< div class = "line" > < a id = "l00102" name = "l00102" > < / a > < span class = "lineno" > 102< / span > [](< span class = "keywordtype" > unsigned< / span > < span class = "keywordtype" > char< / span > ch){ return !std::isspace(ch); });< / div >
< div class = "line" > < a id = "l00103" name = "l00103" > < / a > < span class = "lineno" > 103< / span > < span class = "keywordflow" > return< / span > std::string(startIt, ritr.base());< / div >
< div class = "line" > < a id = "l00104" name = "l00104" > < / a > < span class = "lineno" > 104< / span > }< / div >
< / div >
< div class = "line" > < a id = "l00105" name = "l00105" > < / a > < span class = "lineno" > 105< / span > < / div >
< div class = "line" > < a id = "l00106" name = "l00106" > < / a > < span class = "lineno" > 106< / span > }< / div >
< div class = "ttc" id = "aclassgridfire_1_1_network_html_a0bb7c7be9a3c3212ef6dcbf26dcacb16" > < div class = "ttname" > < a href = "classgridfire_1_1_network.html#a0bb7c7be9a3c3212ef6dcbf26dcacb16" > gridfire::Network::m_logManager< / a > < / div > < div class = "ttdeci" > fourdst::logging::LogManager & m_logManager< / div > < div class = "ttdoc" > Log manager instance.< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "network_8h_source.html#l00097" > network.h:97< / a > < / div > < / div >
< div class = "ttc" id = "aclassgridfire_1_1_network_html_a20b631f2404bfdec2333f680a62abf55" > < div class = "ttname" > < a href = "classgridfire_1_1_network.html#a20b631f2404bfdec2333f680a62abf55" > gridfire::Network::Network< / a > < / div > < div class = "ttdeci" > Network(const NetworkFormat format=NetworkFormat::APPROX8)< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "#l00041" > network.cpp:41< / a > < / div > < / div >
< div class = "ttc" id = "aclassgridfire_1_1_network_html_a315a123499719178286b29e2aca69118" > < div class = "ttname" > < a href = "classgridfire_1_1_network.html#a315a123499719178286b29e2aca69118" > gridfire::Network::getFormat< / a > < / div > < div class = "ttdeci" > NetworkFormat getFormat() const< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "#l00054" > network.cpp:54< / a > < / div > < / div >
< div class = "ttc" id = "aclassgridfire_1_1_network_html_a37218e18f1bdbda7be94aa230f47dd18" > < div class = "ttname" > < a href = "classgridfire_1_1_network.html#a37218e18f1bdbda7be94aa230f47dd18" > gridfire::Network::m_format< / a > < / div > < div class = "ttdeci" > NetworkFormat m_format< / div > < div class = "ttdoc" > Format of the network.< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "network_8h_source.html#l00100" > network.h:100< / a > < / div > < / div >
< div class = "ttc" id = "aclassgridfire_1_1_network_html_a787c601f6e4bd06600bf946efbcc98d4" > < div class = "ttname" > < a href = "classgridfire_1_1_network.html#a787c601f6e4bd06600bf946efbcc98d4" > gridfire::Network::setFormat< / a > < / div > < div class = "ttdeci" > NetworkFormat setFormat(const NetworkFormat format)< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "#l00058" > network.cpp:58< / a > < / div > < / div >
< div class = "ttc" id = "aclassgridfire_1_1_network_html_a960d309defc570f92d296ce4b93920e5" > < div class = "ttname" > < a href = "classgridfire_1_1_network.html#a960d309defc570f92d296ce4b93920e5" > gridfire::Network::m_logger< / a > < / div > < div class = "ttdeci" > quill::Logger * m_logger< / div > < div class = "ttdoc" > Logger instance.< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "network_8h_source.html#l00098" > network.h:98< / a > < / div > < / div >
< div class = "ttc" id = "aclassgridfire_1_1_network_html_a9f8802012728ef5fea0e8cd465044e09" > < div class = "ttname" > < a href = "classgridfire_1_1_network.html#a9f8802012728ef5fea0e8cd465044e09" > gridfire::Network::m_config< / a > < / div > < div class = "ttdeci" > fourdst::config::Config & m_config< / div > < div class = "ttdoc" > Configuration instance.< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "network_8h_source.html#l00096" > network.h:96< / a > < / div > < / div >
< div class = "ttc" id = "aclassgridfire_1_1_network_html_adf7002883160101c9f9d1b376b265410" > < div class = "ttname" > < a href = "classgridfire_1_1_network.html#adf7002883160101c9f9d1b376b265410" > gridfire::Network::m_constants< / a > < / div > < div class = "ttdeci" > fourdst::constant::Constants & m_constants< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "network_8h_source.html#l00101" > network.h:101< / a > < / div > < / div >
2025-07-01 11:40:51 -04:00
< div class = "ttc" id = "anamespacegridfire_1_1reaclib_html_a91c7971c9d0a2971b9a6fa4d841c761d" > < div class = "ttname" > < a href = "namespacegridfire_1_1reaclib.html#a91c7971c9d0a2971b9a6fa4d841c761d" > gridfire::reaclib::get_all_reactions< / a > < / div > < div class = "ttdeci" > const reaction::LogicalReactionSet & get_all_reactions()< / div > < div class = "ttdoc" > Provides global access to the fully initialized REACLIB reaction set.< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "reaclib_8cpp_source.html#l00138" > reaclib.cpp:138< / a > < / div > < / div >
< div class = "ttc" id = "anamespacegridfire_1_1reaction_html" > < div class = "ttname" > < a href = "namespacegridfire_1_1reaction.html" > gridfire::reaction< / a > < / div > < div class = "ttdef" > < b > Definition< / b > < a href = "reaction_8h_source.html#l00025" > reaction.h:25< / a > < / div > < / div >
< div class = "ttc" id = "anamespacegridfire_1_1reaction_html_aa86f08712565f278adacc7cd2361eb31" > < div class = "ttname" > < a href = "namespacegridfire_1_1reaction.html#aa86f08712565f278adacc7cd2361eb31" > gridfire::reaction::LogicalReactionSet< / a > < / div > < div class = "ttdeci" > TemplatedReactionSet< LogicalReaction > LogicalReactionSet< / div > < div class = "ttdoc" > A set of logical reactions.< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "reaction_8h_source.html#l00557" > reaction.h:557< / a > < / div > < / div >
< div class = "ttc" id = "anamespacegridfire_html" > < div class = "ttname" > < a href = "namespacegridfire.html" > gridfire< / a > < / div > < div class = "ttdef" > < b > Definition< / b > < a href = "engine__abstract_8h_source.html#l00024" > engine_abstract.h:24< / a > < / div > < / div >
2025-07-01 07:24:18 -04:00
< div class = "ttc" id = "anamespacegridfire_html_a3f3d6b3f9742b70e62049ccefbb60f37" > < div class = "ttname" > < a href = "namespacegridfire.html#a3f3d6b3f9742b70e62049ccefbb60f37" > gridfire::NetworkFormat< / a > < / div > < div class = "ttdeci" > NetworkFormat< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "network_8h_source.html#l00041" > network.h:41< / a > < / div > < / div >
< div class = "ttc" id = "anamespacegridfire_html_a3f3d6b3f9742b70e62049ccefbb60f37aac700abde5f6ff8b7328193eb19697b2" > < div class = "ttname" > < a href = "namespacegridfire.html#a3f3d6b3f9742b70e62049ccefbb60f37aac700abde5f6ff8b7328193eb19697b2" > gridfire::UNKNOWN< / a > < / div > < div class = "ttdeci" > @ UNKNOWN< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "network_8h_source.html#l00044" > network.h:44< / a > < / div > < / div >
< div class = "ttc" id = "anamespacegridfire_html_a8b245f261cd8d1711ae8d593b054cf98" > < div class = "ttname" > < a href = "namespacegridfire.html#a8b245f261cd8d1711ae8d593b054cf98" > gridfire::trim_whitespace< / a > < / div > < div class = "ttdeci" > std::string trim_whitespace(const std::string & str)< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "#l00091" > network.cpp:91< / a > < / div > < / div >
< div class = "ttc" id = "anamespacegridfire_html_aa77f83539d9ae90e3bf541309bd9c83a" > < div class = "ttname" > < a href = "namespacegridfire.html#aa77f83539d9ae90e3bf541309bd9c83a" > gridfire::build_reaclib_nuclear_network< / a > < / div > < div class = "ttdeci" > reaction::LogicalReactionSet build_reaclib_nuclear_network(const fourdst::composition::Composition & composition, bool reverse)< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "#l00064" > network.cpp:64< / a > < / div > < / div >
< div class = "ttc" id = "anetwork_8h_html" > < div class = "ttname" > < a href = "network_8h.html" > network.h< / a > < / div > < / div >
< div class = "ttc" id = "areaclib_8h_html" > < div class = "ttname" > < a href = "reaclib_8h.html" > reaclib.h< / a > < / div > < / div >
< div class = "ttc" id = "areaction_8h_html" > < div class = "ttname" > < a href = "reaction_8h.html" > reaction.h< / a > < / div > < div class = "ttdoc" > Defines classes for representing and managing nuclear reactions.< / div > < / div >
< div class = "ttc" id = "astructgridfire_1_1_net_in_html_a13058f4929e72c1187abbebcddb8aed1" > < div class = "ttname" > < a href = "structgridfire_1_1_net_in.html#a13058f4929e72c1187abbebcddb8aed1" > gridfire::NetIn::composition< / a > < / div > < div class = "ttdeci" > fourdst::composition::Composition composition< / div > < div class = "ttdoc" > Composition of the network.< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "network_8h_source.html#l00054" > network.h:54< / a > < / div > < / div >
< div class = "ttc" id = "astructgridfire_1_1_net_in_html_a47781e8d5503e3b4f12d669e2cbcfb65" > < div class = "ttname" > < a href = "structgridfire_1_1_net_in.html#a47781e8d5503e3b4f12d669e2cbcfb65" > gridfire::NetIn::MolarAbundance< / a > < / div > < div class = "ttdeci" > std::vector< double > MolarAbundance() const< / div > < div class = "ttdef" > < b > Definition< / b > < a href = "#l00030" > network.cpp:30< / a > < / div > < / div >
< / div > <!-- fragment --> < / div > <!-- contents -->
< / div > <!-- doc - content -->
<!-- start footer part -->
< div id = "nav-path" class = "navpath" > <!-- id is needed for treeview function! -->
< ul >
< li class = "navelem" > < a class = "el" href = "dir_68267d1309a1af8e8297ef4c3efbcdba.html" > src< / a > < / li > < li class = "navelem" > < a class = "el" href = "dir_fc4c7f03e1a69a98c370fae55a743828.html" > network< / a > < / li > < li class = "navelem" > < a class = "el" href = "dir_a7655658c851688eff9381235a9676f0.html" > lib< / a > < / li > < li class = "navelem" > < a class = "el" href = "network_8cpp.html" > network.cpp< / a > < / li >
< li class = "footer" > Generated by < a href = "https://www.doxygen.org/index.html" > < img class = "footer" src = "doxygen.svg" width = "104" height = "31" alt = "doxygen" / > < / a > 1.13.2 < / li >
< / ul >
< / div >
< / body >
< / html >