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Here is a list of all functions with links to the classes they belong to:

### - c -

- calculate_energy_generation_rate() : gridfire::engine::Reaction, gridfire::rates::weak::WeakReaction, gridfire::reaction::Reaction
- calculate_log_rate_partial_deriv_wrt_T9() : gridfire::engine::Reaction, gridfire::rates::weak::WeakReaction, gridfire::reaction::LogicalReaclibReaction, gridfire::reaction::ReaclibReaction, gridfire::reaction::Reaction
- calculate_rate() : gridfire::engine::Reaction, gridfire::rates::weak::WeakReaction, gridfire::reaction::LogicalReaclibReaction, gridfire::reaction::ReaclibReaction, gridfire::reaction::Reaction
- calculate_rhs() : gridfire::solver::PointSolver
- calculateAllDerivatives() : gridfire::engine::GraphEngine
- calculateAllDerivativesUsingPrecomputation() : gridfire::engine::GraphEngine
- calculateAllReactionFlows() : gridfire::engine::AdaptiveEngineView
- calculateEpsDerivatives() : gridfire::engine::AdaptiveEngineView, gridfire::engine::DefinedEngineView, gridfire::engine::DynamicEngine, gridfire::engine::GraphEngine, gridfire::engine::MultiscalePartitioningEngineView, PyDynamicEngine
- calculateFactors_impl() : gridfire::screening::BareScreeningModel, gridfire::screening::IntermediateScreeningModel, gridfire::screening::WeakScreeningModel
- calculateMolarReactionFlow() : gridfire::engine::AdaptiveEngineView, gridfire::engine::DefinedEngineView, gridfire::engine::DynamicEngine, gridfire::engine::GraphEngine, gridfire::engine::MultiscalePartitioningEngineView, PyDynamicEngine
- calculateReverseMolarReactionFlow() : gridfire::engine::GraphEngine
- calculateReverseRate() : gridfire::engine::GraphEngine
- calculateReverseRateTwoBody() : gridfire::engine::GraphEngine
- calculateReverseRateTwoBodyDerivative() : gridfire::engine::GraphEngine
- calculateRHSAndEnergy() : gridfire::engine::AdaptiveEngineView, gridfire::engine::DefinedEngineView, gridfire::engine::Engine, gridfire::engine::GraphEngine, gridfire::engine::MultiscalePartitioningEngineView, PyDynamicEngine, PyEngine
- calculateScreeningFactors() : gridfire::screening::BareScreeningModel, gridfire::screening::IntermediateScreeningModel, gridfire::screening::ScreeningModel, gridfire::screening::WeakScreeningModel, PyScreening
- chapter() : gridfire::reaction::ReaclibReaction
- check() : gridfire::trigger::AndTrigger< TriggerContextStruct >, gridfire::trigger::EveryNthTrigger< TriggerContextStruct >, gridfire::trigger::NotTrigger< TriggerContextStruct >, gridfire::trigger::OrTrigger< TriggerContextStruct >, gridfire::trigger::solver::CVODE::BoundaryFluxTrigger, gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger, gridfire::trigger::solver::CVODE::OffDiagonalTrigger, gridfire::trigger::solver::CVODE::SimulationTimeTrigger, gridfire::trigger::solver::CVODE::TimestepCollapseTrigger, gridfire::trigger::Trigger< TriggerContextStruct >
- check_status() : gridfire::policy::MainSequencePolicy
- clear() : gridfire::engine::ReactionSet, gridfire::reaction::ReactionSet
- clear_callback() : gridfire::solver::GridSolverContext
- clear_context() : gridfire::solver::PointSolverContext
- clone() : gridfire::engine::MultiscalePartitioningEngineView::QSESolver, gridfire::engine::Reaction, gridfire::engine::scratch::AbstractScratchPad, gridfire::engine::scratch::AdaptiveEngineViewScratchPad, gridfire::engine::scratch::DefinedEngineViewScratchPad, gridfire::engine::scratch::GraphEngineScratchPad, gridfire::engine::scratch::MultiscalePartitioningEngineViewScratchPad, gridfire::partition::CompositePartitionFunction, gridfire::partition::GroundStatePartitionFunction, gridfire::partition::PartitionFunction, gridfire::partition::RauscherThielemannPartitionFunction, gridfire::policy::CNOIChainPolicy, gridfire::policy::CNOIIChainPolicy, gridfire::policy::CNOIIIChainPolicy, gridfire::policy::CNOIVChainPolicy, gridfire::policy::HotCNOIChainPolicy, gridfire::policy::HotCNOIIChainPolicy, gridfire::policy::HotCNOIIIChainPolicy, gridfire::policy::MultiReactionChainPolicy, gridfire::policy::ProtonProtonIChainPolicy, gridfire::policy::ProtonProtonIIChainPolicy, gridfire::policy::ProtonProtonIIIChainPolicy, gridfire::policy::ReactionChainPolicy, gridfire::policy::TripleAlphaChainPolicy, gridfire::rates::weak::WeakReaction, gridfire::reaction::LogicalReaclibReaction, gridfire::reaction::ReaclibReaction, gridfire::reaction::Reaction, gridfire::reaction::WeakReaclibReaction, PyPartitionFunction, PyReactionChainPolicy
- clone_structure() : gridfire::engine::scratch::StateBlob
- CNOChainPolicy() : gridfire::policy::CNOChainPolicy
- CNOIChainPolicy() : gridfire::policy::CNOIChainPolicy
- CNOIIChainPolicy() : gridfire::policy::CNOIIChainPolicy
- CNOIIIChainPolicy() : gridfire::policy::CNOIIIChainPolicy
- CNOIVChainPolicy() : gridfire::policy::CNOIVChainPolicy
- collect() : gridfire::engine::DefinedEngineView
- collectAtomicReverseRateAtomicBases() : gridfire::engine::GraphEngine
- collectComposition() : gridfire::engine::AdaptiveEngineView, gridfire::engine::DefinedEngineView, gridfire::engine::DynamicEngine, gridfire::engine::GraphEngine, gridfire::engine::MultiscalePartitioningEngineView, PyDynamicEngine
- collectNetworkSpecies() : gridfire::engine::GraphEngine
- Column() : gridfire::utils::Column< T >
- CompositePartitionFunction() : gridfire::partition::CompositePartitionFunction
- compute_neutrino_fluxes() : gridfire::engine::GraphEngine
- compute_reaction_flow() : gridfire::engine::GraphEngine
- construct() : gridfire::policy::MainSequencePolicy, gridfire::policy::NetworkPolicy, PyNetworkPolicy
- constructCandidateGroups() : gridfire::engine::MultiscalePartitioningEngineView
- constructPrimingReactionSet() : gridfire::engine::NetworkPrimingEngineView
- constructReactionIndexMap() : gridfire::engine::DefinedEngineView
- constructSpeciesIndexMap() : gridfire::engine::DefinedEngineView
- constructStateBlob() : gridfire::engine::AdaptiveEngineView, gridfire::engine::DefinedEngineView, gridfire::engine::DynamicEngine, gridfire::engine::GraphEngine, gridfire::engine::MultiscalePartitioningEngineView, PyDynamicEngine
- contains() : gridfire::engine::MultiscalePartitioningEngineView::QSEGroup, gridfire::engine::Reaction, gridfire::engine::ReactionSet, gridfire::policy::MultiReactionChainPolicy, gridfire::policy::ReactionChainPolicy, gridfire::policy::TemperatureDependentChainPolicy, gridfire::rates::weak::WeakReaction, gridfire::reaction::ReaclibReaction, gridfire::reaction::Reaction, gridfire::reaction::ReactionSet, PyReactionChainPolicy
- contains_product() : gridfire::engine::Reaction, gridfire::engine::ReactionSet, gridfire::rates::weak::WeakReaction, gridfire::reaction::ReaclibReaction, gridfire::reaction::Reaction, gridfire::reaction::ReactionSet
- contains_reactant() : gridfire::engine::Reaction, gridfire::engine::ReactionSet, gridfire::rates::weak::WeakReaction, gridfire::reaction::ReaclibReaction, gridfire::reaction::Reaction, gridfire::reaction::ReactionSet
- contains_species() : gridfire::engine::ReactionSet, gridfire::reaction::ReactionSet
- containsAlgebraic() : gridfire::engine::MultiscalePartitioningEngineView::QSEGroup
- containsSeed() : gridfire::engine::MultiscalePartitioningEngineView::QSEGroup
- ConvergenceFailureTrigger() : gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger
- countProductOccurrences() : gridfire::engine::Reaction, gridfire::rates::weak::WeakReaction, gridfire::reaction::ReaclibReaction, gridfire::reaction::Reaction
- countReactantOccurrences() : gridfire::engine::Reaction, gridfire::rates::weak::WeakReaction, gridfire::reaction::ReaclibReaction, gridfire::reaction::Reaction
- cullReactionsByFlow() : gridfire::engine::AdaptiveEngineView
- current_mean() : gridfire::trigger::solver::CVODE::ConvergenceFailureTrigger
- cvode_error_handler() : gridfire::solver::PointSolver
- cvode_jac_wrapper() : gridfire::solver::PointSolver
- cvode_rhs_wrapper() : gridfire::solver::PointSolver