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gridfire::engine::MultiscalePartitioningEngineView Member List

This is the complete list of members for gridfire::engine::MultiscalePartitioningEngineView, including all inherited members.

analyzeTimescalePoolConnectivity(scratch::StateBlob &ctx, const std::vector< std::vector< fourdst::atomic::Species > > &timescale_pools, const fourdst::composition::Composition &comp, double T9, double rho) const | gridfire::engine::MultiscalePartitioningEngineView | private
buildConnectivityGraph(scratch::StateBlob &ctx, const std::vector< fourdst::atomic::Species > &species_pool, const fourdst::composition::Composition &comp, double T9, double rho) const | gridfire::engine::MultiscalePartitioningEngineView | private
calculateEpsDerivatives(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
calculateMolarReactionFlow(scratch::StateBlob &ctx, const reaction::Reaction &reaction, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
calculateRHSAndEnergy(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, bool trust) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
collectComposition(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
constructCandidateGroups(scratch::StateBlob &ctx, const std::vector< std::vector< fourdst::atomic::Species > > &candidate_pools, const fourdst::composition::Composition &comp, double T9, double rho) const | gridfire::engine::MultiscalePartitioningEngineView | private
constructStateBlob(const scratch::StateBlob *blob) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
exportToDot(scratch::StateBlob &ctx, const std::string &filename, const fourdst::composition::Composition &comp, double T9, double rho) const | gridfire::engine::MultiscalePartitioningEngineView |
generateJacobianMatrix(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
generateJacobianMatrix(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const std::vector< fourdst::atomic::Species > &activeSpecies) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
generateJacobianMatrix(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const SparsityPattern &sparsityPattern) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getBaseEngine() const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getDynamicSpecies(scratch::StateBlob &ctx) | gridfire::engine::MultiscalePartitioningEngineView | static
getFastSpecies(scratch::StateBlob &ctx) const | gridfire::engine::MultiscalePartitioningEngineView |
getInactiveNetworkReactions(scratch::StateBlob &ctx) const | gridfire::engine::DynamicEngine | inlinevirtual
getInactiveReactionMolarReactionFlow(scratch::StateBlob &ctx, const reaction::Reaction &reaction, const fourdst::composition::CompositionAbstract &comp, const double T9, const double rho) const | gridfire::engine::DynamicEngine | inlinevirtual
getMostRecentRHSCalculation(scratch::StateBlob &) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getNetworkReactions(scratch::StateBlob &ctx) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getNetworkSpecies(scratch::StateBlob &ctx) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getNormalizedEquilibratedComposition(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, bool trust) const | gridfire::engine::MultiscalePartitioningEngineView |
getScreeningModel(scratch::StateBlob &ctx) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getSpeciesDestructionTimescales(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getSpeciesIndex(scratch::StateBlob &ctx, const fourdst::atomic::Species &species) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getSpeciesStatus(scratch::StateBlob &ctx, const fourdst::atomic::Species &species) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
getSpeciesTimescales(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
group_is_a_qse_cluster(scratch::StateBlob &ctx, const fourdst::composition::Composition &comp, double T9, double rho, const QSEGroup &group) const | gridfire::engine::MultiscalePartitioningEngineView | private
group_is_a_qse_pipeline(scratch::StateBlob &ctx, const fourdst::composition::Composition &comp, double T9, double rho, const QSEGroup &group) const | gridfire::engine::MultiscalePartitioningEngineView | private
identifyMeanSlowestPool(scratch::StateBlob &ctx, const std::vector< std::vector< fourdst::atomic::Species > > &pools, const fourdst::composition::Composition &comp, double T9, double rho) const | gridfire::engine::MultiscalePartitioningEngineView | private
involvesSpecies(scratch::StateBlob &ctx, const fourdst::atomic::Species &species) | gridfire::engine::MultiscalePartitioningEngineView | static
involvesSpeciesInDynamic(scratch::StateBlob &ctx, const fourdst::atomic::Species &species) | gridfire::engine::MultiscalePartitioningEngineView | static
involvesSpeciesInQSE(scratch::StateBlob &ctx, const fourdst::atomic::Species &species) | gridfire::engine::MultiscalePartitioningEngineView | static
m_baseEngine | gridfire::engine::MultiscalePartitioningEngineView | private
m_logger | gridfire::engine::MultiscalePartitioningEngineView | private
merge_coupled_groups(scratch::StateBlob &ctx, const std::vector< QSEGroup > &groups, const std::vector< reaction::ReactionSet > &groupReactions) | gridfire::engine::MultiscalePartitioningEngineView | privatestatic
MultiscalePartitioningEngineView(DynamicEngine &baseEngine) | gridfire::engine::MultiscalePartitioningEngineView | explicit
partitionByTimescale(scratch::StateBlob &ctx, const fourdst::composition::Composition &comp, double T9, double rho) const | gridfire::engine::MultiscalePartitioningEngineView | private
partitionNetwork(scratch::StateBlob &ctx, const NetIn &netIn) const | gridfire::engine::MultiscalePartitioningEngineView |
primeEngine(scratch::StateBlob &ctx, const NetIn &netIn) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
project(scratch::StateBlob &ctx, const NetIn &netIn) const override | gridfire::engine::MultiscalePartitioningEngineView | virtual
pruneValidatedGroups(scratch::StateBlob &ctx, const std::vector< QSEGroup > &groups, const std::vector< reaction::ReactionSet > &groupReactions, const fourdst::composition::Composition &comp, double T9, double rho) const | gridfire::engine::MultiscalePartitioningEngineView | private
QSEPartition typedef | gridfire::engine::MultiscalePartitioningEngineView | private
solveQSEAbundances(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const -> fourdst::composition::Composition | gridfire::engine::MultiscalePartitioningEngineView | private
validateGroupsWithFluxAnalysis(scratch::StateBlob &ctx, const std::vector< QSEGroup > &candidate_groups, const fourdst::composition::Composition &comp, double T9, double rho) const | gridfire::engine::MultiscalePartitioningEngineView | private
~Engine()=default | gridfire::engine::Engine | virtual
~EngineView()=default | gridfire::engine::EngineView< DynamicEngine > | virtual