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gridfire::engine::GraphEngine Member List

This is the complete list of members for gridfire::engine::GraphEngine, including all inherited members.

accumulate_flows_serial(scratch::StateBlob &ctx, const std::vector< double > &local_abundances, const std::vector< double > &screening_factors, const std::vector< double > &bare_rates, const std::vector< double > &bare_reverse_rates, double rho, const reaction::ReactionSet &activeReactions) const | gridfire::engine::GraphEngine | private
addReaction(const reaction::Reaction &reaction) | gridfire::engine::GraphEngine |
addReaction(const std::string &reaction_id) | gridfire::engine::GraphEngine |
calculateAllDerivatives(const std::vector< T > &Y_in, T T9, T rho, T Ye, T mue, std::function< std::optional< size_t >(const fourdst::atomic::Species &)> speciesLookup, const std::function< bool(const reaction::Reaction &)> &reactionLookup) const | gridfire::engine::GraphEngine | private
calculateAllDerivatives(const std::vector< T > &Y_in, const T T9, const T rho, const T Ye, const T mue, const std::function< std::optional< size_t >(const fourdst::atomic::Species &)> speciesLookup, const std::function< bool(const reaction::Reaction &)> &reactionLookup) const | gridfire::engine::GraphEngine |
calculateAllDerivativesUsingPrecomputation(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, const std::vector< double > &bare_rates, const std::vector< double > &bare_reverse_rates, double T9, double rho, const reaction::ReactionSet &activeReactions) const | gridfire::engine::GraphEngine | private
calculateEpsDerivatives(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::GraphEngine | virtual
calculateEpsDerivatives(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const reaction::ReactionSet &activeReactions) const | gridfire::engine::GraphEngine |
calculateMolarReactionFlow(scratch::StateBlob &, const reaction::Reaction &reaction, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::GraphEngine | virtual
calculateMolarReactionFlow(const reaction::Reaction &reaction, const std::vector< T > &Y, T T9, T rho, T Ye, T mue, const std::function< std::optional< size_t >(const fourdst::atomic::Species &)> &speciesIDLookup) const | gridfire::engine::GraphEngine | private
calculateReverseMolarReactionFlow(T T9, T rho, std::vector< T > screeningFactors, const std::vector< T > &Y, size_t reactionIndex, const reaction::Reaction &reaction) const | gridfire::engine::GraphEngine | private
calculateReverseRate(const reaction::Reaction &reaction, double T9, double rho, const fourdst::composition::CompositionAbstract &comp) const | gridfire::engine::GraphEngine |
calculateReverseRateTwoBody(const reaction::Reaction &reaction, double T9, double forwardRate, double expFactor) const | gridfire::engine::GraphEngine |
calculateReverseRateTwoBodyDerivative(const reaction::Reaction &reaction, double T9, double rho, const fourdst::composition::Composition &comp, double reverseRate) const | gridfire::engine::GraphEngine |
calculateRHSAndEnergy(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, bool trust) const override | gridfire::engine::GraphEngine | virtual
calculateRHSAndEnergy(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const reaction::ReactionSet &activeReactions) const | gridfire::engine::GraphEngine |
collectAtomicReverseRateAtomicBases() | gridfire::engine::GraphEngine | private
collectComposition(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::GraphEngine | virtual
collectNetworkSpecies() | gridfire::engine::GraphEngine | private
compute_neutrino_fluxes(scratch::StateBlob &ctx, double netFlow, const reaction::Reaction &reaction) const | gridfire::engine::GraphEngine | private

compute_reaction_flow(scratch::StateBlob &ctx, const std::vector< double > &local_abundances, const std::vector< double > &screening_factors, const std::vector< double > &bare_rates, const std::vector< double > &bare_reverse_rates, double rho, size_t reactionCounter, const reaction::Reaction &reaction, size_t reactionIndex, const PrecomputedReaction &precomputedReaction) const

gridfire::engine::GraphEngine

private

constructStateBlob(const scratch::StateBlob *blob=nullptr) const override | gridfire::engine::GraphEngine | virtual
exportToCSV(scratch::StateBlob &ctx, const std::string &filename) const | gridfire::engine::GraphEngine |
exportToDot(scratch::StateBlob &ctx, const std::string &filename) const | gridfire::engine::GraphEngine |
generate_jacobian_sparsity_pattern() | gridfire::engine::GraphEngine |
generateJacobianMatrix(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::GraphEngine | virtual
generateJacobianMatrix(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const std::vector< fourdst::atomic::Species > &activeSpecies) const override | gridfire::engine::GraphEngine | virtual
generateJacobianMatrix(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const SparsityPattern &sparsityPattern) const override | gridfire::engine::GraphEngine | virtual
get_store_intermediate_reaction_contributions() const | gridfire::engine::GraphEngine | inline
getAuthoritativeADFun() const | gridfire::engine::GraphEngine | inline
getInactiveNetworkReactions(scratch::StateBlob &ctx) const | gridfire::engine::DynamicEngine | inlinevirtual
getInactiveReactionMolarReactionFlow(scratch::StateBlob &ctx, const reaction::Reaction &reaction, const fourdst::composition::CompositionAbstract &comp, const double T9, const double rho) const | gridfire::engine::DynamicEngine | inlinevirtual
getMostRecentRHSCalculation(scratch::StateBlob &) const override | gridfire::engine::GraphEngine | virtual
getNetworkReactions(scratch::StateBlob &) const override | gridfire::engine::GraphEngine | virtual
getNetworkSpecies(scratch::StateBlob &ctx) const override | gridfire::engine::GraphEngine | virtual
getPartitionFunction(scratch::StateBlob &ctx) const | gridfire::engine::GraphEngine |
getScreeningModel(scratch::StateBlob &ctx) const override | gridfire::engine::GraphEngine | virtual
getSpeciesDestructionTimescales(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::GraphEngine | virtual
getSpeciesDestructionTimescales(scratch::StateBlob &ctx, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const reaction::ReactionSet &activeReactions) const | gridfire::engine::GraphEngine |
getSpeciesIndex(scratch::StateBlob &ctx, const fourdst::atomic::Species &species) const override | gridfire::engine::GraphEngine | virtual
getSpeciesStatus(scratch::StateBlob &, const fourdst::atomic::Species &species) const override | gridfire::engine::GraphEngine | virtual
getSpeciesTimescales(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho) const override | gridfire::engine::GraphEngine | virtual
getSpeciesTimescales(scratch::StateBlob &, const fourdst::composition::CompositionAbstract &comp, double T9, double rho, const reaction::ReactionSet &activeReactions) const | gridfire::engine::GraphEngine |
GraphEngine(const fourdst::composition::Composition &composition, BuildDepthType=NetworkBuildDepth::Full) | gridfire::engine::GraphEngine | explicit
GraphEngine(const fourdst::composition::Composition &composition, const partition::PartitionFunction &partitionFunction, BuildDepthType buildDepth=NetworkBuildDepth::Full) | gridfire::engine::GraphEngine | explicit
GraphEngine(const fourdst::composition::Composition &composition, const partition::PartitionFunction &partitionFunction, BuildDepthType buildDepth, NetworkConstructionFlags reactionTypes) | gridfire::engine::GraphEngine | explicit
GraphEngine(const reaction::ReactionSet &reactions) | gridfire::engine::GraphEngine | explicit
involvesSpecies(scratch::StateBlob &ctx, const fourdst::atomic::Species &species) const | gridfire::engine::GraphEngine |
isPrecomputationEnabled(scratch::StateBlob &ctx) const | gridfire::engine::GraphEngine |
isUsingReverseReactions(scratch::StateBlob &ctx) const | gridfire::engine::GraphEngine |
JacobianMatrixState enum name | gridfire::engine::GraphEngine | private
m_atomicReverseRates | gridfire::engine::GraphEngine | private
m_authoritativeADFun | gridfire::engine::GraphEngine | private
m_config | gridfire::engine::GraphEngine | private
m_constants | gridfire::engine::GraphEngine | private
m_depth | gridfire::engine::GraphEngine | private
m_full_jacobian_sparsity_pattern | gridfire::engine::GraphEngine | private
m_full_sparsity_set | gridfire::engine::GraphEngine | private
m_indexToSpeciesMap | gridfire::engine::GraphEngine | private
m_jacobianMatrixStateNameMap | gridfire::engine::GraphEngine | private
m_logger | gridfire::engine::GraphEngine | private
m_networkSpecies | gridfire::engine::GraphEngine | private
m_networkSpeciesMap | gridfire::engine::GraphEngine | private
m_partitionFunction | gridfire::engine::GraphEngine | private
m_precomputed_reaction_index_map | gridfire::engine::GraphEngine | private
m_precomputed_reactions | gridfire::engine::GraphEngine | private
m_reactionIDMap | gridfire::engine::GraphEngine | private
m_reactions | gridfire::engine::GraphEngine | private
m_screeningModel | gridfire::engine::GraphEngine | private
m_screeningType | gridfire::engine::GraphEngine | private
m_speciesToIndexMap | gridfire::engine::GraphEngine | private
m_store_intermediate_reaction_contributions | gridfire::engine::GraphEngine | private
m_usePrecomputation | gridfire::engine::GraphEngine | private
m_useReverseReactions | gridfire::engine::GraphEngine | private
m_weakRateInterpolator | gridfire::engine::GraphEngine | private
populateReactionIDMap() | gridfire::engine::GraphEngine | private
populateSpeciesToIndexMap() | gridfire::engine::GraphEngine | private
precomputeNetwork() | gridfire::engine::GraphEngine | private
primeEngine(scratch::StateBlob &ctx, const NetIn &netIn) const override | gridfire::engine::GraphEngine | virtual
project(scratch::StateBlob &ctx, const NetIn &netIn) const override | gridfire::engine::GraphEngine | virtual
recordADTape() | gridfire::engine::GraphEngine | private
set_store_intermediate_reaction_contributions(const bool value) | gridfire::engine::GraphEngine | inline
syncInternalMaps() | gridfire::engine::GraphEngine | private
~Engine()=default | gridfire::engine::Engine | virtual